Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1776 ATGATTTTCTTTCTAATCTTGTGCACTAGCTATTTTTTCTCTCTTGGTAGAGCTGCAGATTGTGGTGGGAAGATAATTGTATATAACATCACTGTTGCTCAACATGGCAAAGGAGATTTCAAAACTGTTCAAGCTGCCATTGATTCTATAAGGAGTAACAATAATCAATGGGTTAAGATTCACATAAAACCTGGCTTGTATATAGAAAAGGTTCATATTCCCAGAGAAAAGCCATGCATCATTTTAGAAGGAGCAGGTAGCCCAACCACATTAATCTCTTATGGTGACTTCCAAAAAACAGGTTTGAGTGCTACATTTACATCATCTCCACCCAATGTGATTGTGAGTGGCATCACCTTCAAGAATTCACATAATTTGGGGCATGAATGGACCAAAAGAAAAGTCTTACCCGCAGTGGCAGCGAGAGTATATGGAGAGAAATCTTTCTTCTTTAAATGCAGTTTCTTAGGTGTTCAAGACACCTTGTTTGATGTAATGGGACGCCATTACTTTAAAGATTGCTATATTCAGGGTGCAATCGACTTCATTTTTGGTGCAGGCCAATCTTTTTATGAGAGTTGTGTGATCAACGCCACAGGGAGGGGTACCCTTACAGGTTTTGTCACAGCCCAAAGCAGGAATTCAGCAAGTGACACAGGTGGTTTTATATTTAAGGGGGGTTCCCTTATTGGGACTGGTAAAGTGAATTTAGGAAGGCCATGGGGCCCTTACTCCAGAGTTATTTTTTATGGAACATACTTTTCTTCCATAATAACTCCCAATGGATGGAATGCTTGGAACGTCGTGGGCCAAGAGAATAAGTTAACGTATGGTGAAGTTGGATGTACAGGACCTGGGGCTGATACTTCTAAGCGTGTCCCGTGGGAGAAGAAGCTAAATCCTTTACAGATGGAAGGAGAATTTTCTTTAGCTTCTTTTATCAATAAAGATGGATGGCTTGAGAACTTACCAACTATCTCCTAA 984 0.4035 MIFFLILCTSYFFSLGRAADCGGKIIVYNITVAQHGKGDFKTVQAAIDSIRSNNNQWVKIHIKPGLYIEKVHIPREKPCIILEGAGSPTTLISYGDFQKTGLSATFTSSPPNVIVSGITFKNSHNLGHEWTKRKVLPAVAARVYGEKSFFFKCSFLGVQDTLFDVMGRHYFKDCYIQGAIDFIFGAGQSFYESCVINATGRGTLTGFVTAQSRNSASDTGGFIFKGGSLIGTGKVNLGRPWGPYSRVIFYGTYFSSIITPNGWNAWNVVGQENKLTYGEVGCTGPGADTSKRVPWEKKLNPLQMEGEFSLASFINKDGWLENLPTIS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1776 327 Pfam Pectinesterase 29 316 IPR000070 GO:0030599|GO:0042545
Apr9g1776 327 Gene3D - 26 326 IPR012334 -
Apr9g1776 327 PANTHER PECTINESTERASE 1 326 - -
Apr9g1776 327 ProSitePatterns Pectinesterase signature 2. 176 185 IPR033131 -
Apr9g1776 327 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 326 - -
Apr9g1776 327 SUPERFAMILY Pectin lyase-like 29 322 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1776 Apr-Chr9 26751752 26753542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1776 23 272 Carbohydrate Esterase AT2G19150 48.819 5.91e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1776 - - var:108336510 393.66