Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1775 ATGGAATTGTTTCCTGGACCAATGATTTTCTTTCTAATATTTTCTACTGGTGGTTTTTTTCCTCTTGCTAGAGCCACAAATTGTGGTGGGAATATCATTGCAAATACCATCACTGATGAAAAGGTTTACATTCCCTTAGAAAAGCCATGCATCATTTTGGAAGGAGCTGGTAGCGAGTCCACGCTCATCAGTTACGGTGATCATGGAATAACAGACATAAGTGCTACATTCACTTCATTGCCACAATATGTGGTTGCAATTGGCATTGGCTTCAAGAATTGCACAATGAACGCTGTGGGGAGGTATAGTTCTCTAGGTTTTGTCACAGCCCAACGCAGGGTTTCAACAAATGATTCAAGTGGTTTTGTATTTAAGGGTGGTTCCATTGTTGGGAGTAATAAAGTGAATTTAGGAAGAGCATGGGGCCCTCATTCAAGAGTTATATTGGATAGATTCACTTACGCTGAAGTTGTGTGTGAAGGAGCAGGAGCTGATACTTCAAGGCGTGTACAGTGGGGGAAGAAGTTGAATCGTTCACAGATAGAACAACATTTTTCTGTAACCTCTTTTATCAATACTGATAGATGGCTCCATAACTTACCAATTATCTCCTAA 615 0.4033 MELFPGPMIFFLIFSTGGFFPLARATNCGGNIIANTITDEKVYIPLEKPCIILEGAGSESTLISYGDHGITDISATFTSLPQYVVAIGIGFKNCTMNAVGRYSSLGFVTAQRRVSTNDSSGFVFKGGSIVGSNKVNLGRAWGPHSRVILDRFTYAEVVCEGAGADTSRRVQWGKKLNRSQIEQHFSVTSFINTDRWLHNLPIIS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1775 204 Gene3D - 89 203 IPR012334 -
Apr9g1775 204 PANTHER PECTINESTERASE 150 203 - -
Apr9g1775 204 PANTHER PECTINESTERASE 39 92 - -
Apr9g1775 204 PANTHER PECTINESTERASE 91 149 - -
Apr9g1775 204 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 92 - -
Apr9g1775 204 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 91 149 - -
Apr9g1775 204 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 150 203 - -
Apr9g1775 204 SUPERFAMILY Pectin lyase-like 39 199 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1775 Apr-Chr9 26746870 26749100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1775 106 198 Carbohydrate Esterase AT1G05310 37.069 8.38e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1775 - - aprc:113874573 416.387