Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1771 ATGAGGAGGGGCAGAGGAGGAGCCACTGCCGCAGCTACTGCGGCGGCGGAGGTTGACGGATCCGGTGCGAGGAACGTTTTAAAGGAGCCTCGTTACCGTGGCGTGAGAAAGAGACCATGGGGGAGATTCGCAGCAGAGATCAGAGACCCTTTGAAGAAAGCGAGGGTTTGGTTAGGAACCTTCGATTCCGCGGAGGAAGCTGCTAGAGCCTACGACGCAGCCGCTAGGAGTCTCCGAGGTCCCAAAGCTAAAACAAATTTCCCTCTCTCACCCTTCTGTTACCATCATCCAACCACCGATCCCTTCTTCTACAACGGTTTTCAAGACCAACACAGCAACCTTCATAACATTAACAACCCTCAGAGACCCACCTCTAGCGGCATGAGTAGCACCGTCGAGTCCTTCAGTGGGCCCCGCCCTCACTCCGTTAAGCCTCCTTCTGCGACGCCGTTTTTGACTGCCACTCGCAGGTACCCTCGGACACCCCCTGTTGTTCCCGAAGATTGCCACAGCGACTGTGACTCCTCCTCCTCCGTATTAGACGACAGAGATAATAACATTGTTTCGTCGTCGTTTCGGCCCCCCTTGCCTTTCGATCTCAATGCGCTGCCTTTTGATGATGACGATGCTCGTGCCGATGTTAACGATAACGATCTTCGATGCACCGCGCTTTGCCTCTGA 681 0.5477 MRRGRGGATAAATAAAEVDGSGARNVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARSLRGPKAKTNFPLSPFCYHHPTTDPFFYNGFQDQHSNLHNINNPQRPTSSGMSSTVESFSGPRPHSVKPPSATPFLTATRRYPRTPPVVPEDCHSDCDSSSSVLDDRDNNIVSSSFRPPLPFDLNALPFDDDDARADVNDNDLRCTALCL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1771 226 MobiDBLite consensus disorder prediction 119 154 - -
Apr9g1771 226 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Apr9g1771 226 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Apr9g1771 226 MobiDBLite consensus disorder prediction 119 137 - -
Apr9g1771 226 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Apr9g1771 226 SUPERFAMILY DNA-binding domain 31 90 IPR016177 GO:0003677
Apr9g1771 226 MobiDBLite consensus disorder prediction 1 26 - -
Apr9g1771 226 PANTHER ETHYLENE RESPONSE FACTOR 4 205 - -
Apr9g1771 226 CDD AP2 30 90 IPR001471 GO:0003700|GO:0006355
Apr9g1771 226 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Apr9g1771 226 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 205 - -
Apr9g1771 226 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Apr9g1771 226 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1771 Apr-Chr9 26725442 26726947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1771 1 226 AP2-EREBP Transcription Factor Family AT1G50640 57.438 1.52e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr9g1771 AP2 1.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1771 K09286 - gmx:100820249 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1771 9 26725442 26726947 Apr9g1771 9 26725442 26726947 ECH