Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1764 ATGGAACCCACTTGGAATGATGCCATTGTGAAGGGTAATTCTACTGTCGCACATTCTTCTGATCCTGTCATGTCCTTTAGAGGGAAACCCCTTGTCATGGATGAGCATGATTTCTTCGCTGAGAAGAAAAAAGAAAGTGAAGATGATGATCCAATGGAGCATAGTGTGGAGAATGTTCATGTAGATACTAGTTTAGATCTTCTTACGAAGAATACCGGTGGCAACAAATCATCAGGGGAAGATGCGGGATTGGAGACTATGGATGATAAGAAAAATGAGTTTGTAGATTTGCTAGCTGAATTGGAACAGATGAATGCTGAAAATCAACGTTTAAGAGATACGATTGATCAGGTGAACAACAACTACAATGTCCTACGCATGCAACTTATCAAGCTAACACACATGCAGCGTAGCCATGGGAACAACCGAGTTAATGAGGAGAAAGAAGATTTGATTGCAAGGCCATTTTTAGAGATGGGTGTTGCTGAGAAGGATGAGCCTTCCCATTCCCAGCAATCTCCAGGGGTAAAACTGAGAGAAAACAAAAGTATGGTTGATTTGATGGATCAGTGCAAGGGACAAGATATTGCTGTTTTGGAGCCAGATAAGGTGGATTCTGGAAAGGAATCTTCAAAAGCCAGAATGGAAGAGAAGCACTCTCACGCTGACCAAGCATTAATCCCTTCAGGGTGCCTCTCTAACAAAGTTCCTAGGTTGGATCAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTCGAGCAAGATCAGATTCTTCAATGATTGCAGATGGATGCCAATGGCGGAAGTATGGGCAAAAGATGGCGAAAGGGAATCCTTGTCCACGAGCTTATTATCGTTGCACAATGAGTACTGGTTGTCCAGTACGCAAACAAGTACAAAGGTGTGCTGAAGATCGAAGTGTGCTGATTACTACATATGAAGGGCAGCATAACCATCCACTCCCTCCTACGGCTCAAGCAATGGCTTCAACAACATCTGCAGCAGCCTCAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCTAATTAATCCAAGCATATTAGAAAGTGCTGCACTTCCATGCTCTCAAAACATGGCTACTCTTTCTGCCTCAGCCCCATTTCCTACCATCACACTTGATCTCACTCAAAATGCTTCCAATTCGTCACAGCTTCAAAGGGAACAACCTCAGAACCAACTTAACCTTCTAACTCCAATTTTGGCTCATAATTTTGCATCAGTTCCAAAATTATTTGGACAGACACTGTCTGATCAAACTAAGTTTTCTGGCTTACATGAGTCTCAAGGAATGGACACAACTTCCTCATTTGCTAACACATTCAATGCAGCTAGTGCTGCTATCACAGCAGATCCAAATTTAACTGCAGCTCTTGTGGCAGCTTTAACATCTATCATTGGAAGTTCACATTCAACCATCAATGGCACCAATAATACAAGTGGAGATGAGCAGTGCAATAATGCATGA 1503 0.4251 MEPTWNDAIVKGNSTVAHSSDPVMSFRGKPLVMDEHDFFAEKKKESEDDDPMEHSVENVHVDTSLDLLTKNTGGNKSSGEDAGLETMDDKKNEFVDLLAELEQMNAENQRLRDTIDQVNNNYNVLRMQLIKLTHMQRSHGNNRVNEEKEDLIARPFLEMGVAEKDEPSHSQQSPGVKLRENKSMVDLMDQCKGQDIAVLEPDKVDSGKESSKARMEEKHSHADQALIPSGCLSNKVPRLDQASETMSMIKKARVSVRARSDSSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINPSILESAALPCSQNMATLSASAPFPTITLDLTQNASNSSQLQREQPQNQLNLLTPILAHNFASVPKLFGQTLSDQTKFSGLHESQGMDTTSSFANTFNAASAAITADPNLTAALVAALTSIIGSSHSTINGTNNTSGDEQCNNA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1764 500 Coils Coil 84 128 - -
Apr9g1764 500 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 485 IPR044810 GO:0003700
Apr9g1764 500 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1764 500 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1764 500 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1764 500 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 16 485 - -
Apr9g1764 500 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1764 500 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1764 Apr-Chr9 26680691 26683807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1764 32 494 WRKY Transcription Factor Family AT1G62300 44.489 1.89e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g1764 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1764 - - gsj:114372133 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0086 2 1355661 1358060 Apr9g1764 9 26680691 26683807 PCT
Apr2g0212 2 2702715 2708826 Apr9g1764 9 26680691 26683807 PCT