Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1761 ATGGCCAATTTGCCCCAATCCATTTCCATGAACGCCGCGTCGTTTGGACCTCCCTCTGCCAACAAGGAACGCAAGATGGCTTCTGTCGAACACCTCGTTCTCGAACTCAGCAATCCCGATCTCCGTGAAAACGCTCTTCTCGAACTCTCCAAGAAGAGAGAGTTGTTTCAGGATCTCGCTCCTTTGTTGTGGAATTCATTTGGTACTATTGCAGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCTCCGCCAAATCTTACTCCAGCACAATCAAATCGGGTTTGCAATGCTCTTGCTCTTCTTCAGTGCGTGGCATCTCACCTTGAAACAAGGATGCAATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACCACAAGTAAGTCAAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGATGTTATAAGTTTCCTTCTTTCAACAGAGATTATTCCACTGTGCCTGCGCAGTATGGAAATGGGCAGTGAATTGTCAAAAACTGTTGCAACCTTTATAGTTCAAAAAATTCTGTTGGATGATTTTGGTTTGAAATATATTTGTACTACGGCAGACCGCTTTTATGCTGTAGGTCGAGTTTTGGCAAACATGGTGGCAGCTCTTGTAGAGCAACCTTCATCTCGTCTTTTGAAGCATATCATTCGATGTTATCTTCGCCTGTCAGATAATCAGAGTGCTTGTGAGGCATTAAGATCCTGTCTTCCGGACATGTTAAGAGATGCCACATTCAATAGCTGCCTTCGTGAAGACCCAACTACTAGGAGGTGGCTACAGCAGTTGCTTCATAATATTGGAGTCAATCGGGTTCCTTCACTTCAAGCTGCAGGAGGATTCGATCATATGATGGTGTCGTGA 933 0.4362 MANLPQSISMNAASFGPPSANKERKMASVEHLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHLETRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTDVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDDFGLKYICTTADRFYAVGRVLANMVAALVEQPSSRLLKHIIRCYLRLSDNQSACEALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNIGVNRVPSLQAAGGFDHMMVS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1761 310 Gene3D - 20 291 IPR011989 -
Apr9g1761 310 SUPERFAMILY ARM repeat 35 291 IPR016024 -
Apr9g1761 310 PANTHER UNCHARACTERIZED 1 308 - -
Apr9g1761 310 Pfam Cell differentiation family, Rcd1-like 32 290 - -
Apr9g1761 310 PANTHER BNAA05G20110D PROTEIN 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1761 Apr-Chr9 26647246 26651414 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Apr9g1761 Rcd1 1e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1761 K12606 - csv:101204529 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1761 9 26647246 26651414 Apr9g1761 9 26647246 26651414 ECH
Apr2g0208 2 2654374 2667667 Apr9g1761 9 26647246 26651414 PCT