Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1749 ATGATTTCTGGTAGGTGTGCAGCTTGCAAGAGTCAGAGAAGAAGGTGTCCTTCAGATTGCATTTTCTCTCCATATTTTCCTGCCAATGATCCTCAAAGATTTGCTTGTGTTCACAGAATATATGGTGGCAGCAATGTTGGAAAAATGCTTCAGCAAATTCCACCATATTTACGAGAACAAGCAGCAAATAGTTTGTATTTTGAAGCACAATGTAGGATTCAAGACCCTGTTTATGGGTGTGCTGGAATTATCTCTAAATTGTCTCAACAAATCCACAGTACAGAAATTGCTCTTGCCAAAATCCAAACTCAGATTGCTTATCACAAACTTCAAATCCCGCGGACAGAAATTGAGTCAAACTTCAATGTCTTGTCGACAATTGAAGCTGAATCAAACTTGGACGTCTTGCCACCACAAAGCAGTAGCATGGGGGAGTTTCAATGGCCACTTCAAGCTTCTTGGTTCAATTAA 471 0.4013 MISGRCAACKSQRRRCPSDCIFSPYFPANDPQRFACVHRIYGGSNVGKMLQQIPPYLREQAANSLYFEAQCRIQDPVYGCAGIISKLSQQIHSTEIALAKIQTQIAYHKLQIPRTEIESNFNVLSTIEAESNLDVLPPQSSSMGEFQWPLQASWFN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1749 156 Coils Coil 84 104 - -
Apr9g1749 156 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Apr9g1749 156 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Apr9g1749 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
Apr9g1749 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1749 Apr-Chr9 26563548 26564151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1749 1 121 AS2 family AT3G26620 60.331 1.39e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr9g1749 LOB 2.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1749 - - ccaj:109810657 252.677