Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1735 ATGAGTGTGGTGGGTTTTGACATTGGAAATGAGAACTGTGTCATTGCTGCAGTGAAGCAACGTGGGGTCGATGTTTTGTTGAATGATGAATCAAAACGTGAAACCCCTGCTGTGGTTTGCTTTGGGGAGAAGCAAAGGTTTCTAGGCTCAGCTGGTGCTGTTTCTGCTTTGATGCACCCAAAGTCCACAATATCTCAAGTCAAAAGACTTATAGGCAGAAAATTTGCAGATTTTGGTGTTCAAAATGAGTTAAAAATGCTACCCTTTGAAACATCTGAAGGCCCTGATGGTGGCATTCTTATTCACTTGAAATACTTGAAGGAGGCTTGTACGTTTACCCCGGTGCAAATAGCAGCAATGCTCTTTGCTCACTTGAAGACTATAGCCGAAAAAGATTTGGGGACTTCGGTTTCAGATTGTGTTATCGGGGTTCCTTCGTACTTTACCAACTTGCAGAGACAGGCATATCTCAATGCAGCTACAATTGTTGGGTTGAAGCCTTTGAGGTTGATCCATGATTGCACTGCAACTGCTCTTAGTTATGGAGTTTATAAAACAGATTCTCCTCGTGCATCTCCTTTTAATGTTGCATTTATTGACATAGGTCATTGTGATACTCAGGTATCTATTGCAGCATTTCAGGCTGGGAAAATGGAGATACTTTCACATGCTTTTGACAGGAGCTTAGGAGGGAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCAGAAAAATTTAAGGAGCAGTACAGCATTGACGTGTATTCTAATGCCAGGGCATGTAATAGGCTGCGTGCAGCATGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATACAGAAGCGCCTCTGAACATTGAGTGTTTGATGGATGAAAAAGATGTTAAAGGCTTTATCAAAAGGGAAGAATTTGAGACTCTGGCGTCAGGATTATTGGAGAGAATTAATGTTCCTTGCAACAAAGCATTAGCTGATGCTGGATTGACTCTAGAAAAGATTAATTCTGTTGAGTTAGTTGGTTCAGGTTCAAGAATTCCAGCTATAACTAGATTATTAAGGTCTCTATTTAAGAGAGAACTCAGCCGAACACTGAATGCCAGTGAATGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTGTTTTGCACTCCAGAGAATATCAGGTTCAGGATTCTTTTCCTTTTTCTATTGGACTTTCATCAAATGAAGGCCCAACTTGTGCAGGGTCAAATGATGTACTCTTCCCAAGAGGCCAACCCATTCCAAGTGTTAAAATTCTAACATTTCAGTGCAGCAATATGCTCCACTTAGAAGCATTCTATGCTAATCCAGATGAAGTACCGCCTGGGACATCTAAAATTAGTTGCTTCAAGATTGGTCCTTTCCATAGATCCCATGGAAGTAAGACAAGAATTAAAGTTCAAGTTCAACTGAACTTGCATGGTATTGTCAGTATTGAATCAGCTACAGTAAGTAAGAAGACTCATTTTTATCTCTTCATGTTGTGTCTTCAGTTGATCGAGGATCATGTAGATGTTTCAGTTACAACAGGTGATGGTCATTCAAATTCTGAAGCAGTGGATGTTGAACCTGTTTCTGAGAGAGTTGAAAGTGTCACTGGAGATAATATCAGAAGAAAGTGTGAATCGCCACATCACTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGAAGCCTTCATATACCAGTGAGTGAGAGTGTCTATGGTGGAATGACCAAGGCTGAGATCTTGGAAGCTCAAGAGAAAGAACACCAGTTAGCCCAGCATGACAGAACAATGGAGCTAACCAAAGACAAGAGGAATTCCTTGGAGTCTTATGTTTATGAAATGAGGAGTAAGCTCTTCAACACATATCGGAGCTTTGCAAGTGAACAAGAGAGGGATGGCATATCAAGGAGTCTGCAAGAGACTGAGGATTGGCTTTATGATGGTGGTGATGATGAAACTGTACATGCTTATTCAGCAAAACTAGAAGAAATAAAACAGCTGGTGGATCCAATTGAGAATCGGTATAAAGATGAAGAAGAAAGAGCCCAAGCTACAAGAGATTTGCTAAGTTGCATTGTAGAGCATCGAATGTCTGCAGATTCTCTTCCACCTCAGAATAAAGAACTGATTAACAATGAGTGCAACAAAGCAGAGCAGTGGCTAAGAGAGAAGATGCAGCTACAAGATTCTTTGCCTAAGAGCTGTGATCCGGTATTTTGGTCAAGTGATATCAAGAGCAAGACAGAGGATTTAAACCTAATATGCCAACGAATATTGAAGCCAAAGGATTCTCCAATTACAGAAGACAAGCAGAATGCTTCTAATCATCAATAA 2352 0.406 MSVVGFDIGNENCVIAAVKQRGVDVLLNDESKRETPAVVCFGEKQRFLGSAGAVSALMHPKSTISQVKRLIGRKFADFGVQNELKMLPFETSEGPDGGILIHLKYLKEACTFTPVQIAAMLFAHLKTIAEKDLGTSVSDCVIGVPSYFTNLQRQAYLNAATIVGLKPLRLIHDCTATALSYGVYKTDSPRASPFNVAFIDIGHCDTQVSIAAFQAGKMEILSHAFDRSLGGRDFDEVLFSHFAEKFKEQYSIDVYSNARACNRLRAACEKLKKVLSANTEAPLNIECLMDEKDVKGFIKREEFETLASGLLERINVPCNKALADAGLTLEKINSVELVGSGSRIPAITRLLRSLFKRELSRTLNASECVARGCALQCAMLSPVLHSREYQVQDSFPFSIGLSSNEGPTCAGSNDVLFPRGQPIPSVKILTFQCSNMLHLEAFYANPDEVPPGTSKISCFKIGPFHRSHGSKTRIKVQVQLNLHGIVSIESATVSKKTHFYLFMLCLQLIEDHVDVSVTTGDGHSNSEAVDVEPVSERVESVTGDNIRRKCESPHHSADGTRKDKANRSLHIPVSESVYGGMTKAEILEAQEKEHQLAQHDRTMELTKDKRNSLESYVYEMRSKLFNTYRSFASEQERDGISRSLQETEDWLYDGGDDETVHAYSAKLEEIKQLVDPIENRYKDEEERAQATRDLLSCIVEHRMSADSLPPQNKELINNECNKAEQWLREKMQLQDSLPKSCDPVFWSSDIKSKTEDLNLICQRILKPKDSPITEDKQNASNHQ* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1735 783 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 499 IPR029047 -
Apr9g1735 783 Gene3D Actin; Chain A, domain 4 230 313 - -
Apr9g1735 783 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Apr9g1735 783 CDD HSPA4_like_NDB 2 381 - -
Apr9g1735 783 MobiDBLite consensus disorder prediction 520 567 - -
Apr9g1735 783 PANTHER HSC70CB, ISOFORM G-RELATED 1 783 - -
Apr9g1735 783 Coils Coil 589 609 - -
Apr9g1735 783 Gene3D - 38 113 - -
Apr9g1735 783 MobiDBLite consensus disorder prediction 541 567 - -
Apr9g1735 783 Pfam Hsp70 protein 3 681 IPR013126 GO:0005524|GO:0140662
Apr9g1735 783 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 386 614 IPR029047 -
Apr9g1735 783 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 783 - -
Apr9g1735 783 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 583 681 IPR029048 -
Apr9g1735 783 Coils Coil 667 687 - -
Apr9g1735 783 Gene3D - 186 360 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 2 15 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 30 42 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 140 160 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 332 348 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 363 383 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 388 407 - -
Apr9g1735 783 PRINTS 70kDa heat shock protein signature 471 487 - -
Apr9g1735 783 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Apr9g1735 783 Gene3D - 5 374 - -
Apr9g1735 783 Gene3D - 581 693 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1735 Apr-Chr9 26474423 26479268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1735 4 431 Calmodulin-binding Proteins AT1G16030 35.035 2.50e-80 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1735 K09489 - gmx:100795914 1235.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1735 9 26474423 26479268 Apr9g1735 9 26474423 26479268 ECH