Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1727 ATGGATGATGATGGACTGAAGGGTGGACATCAAATTTCACTCTCTCTTGTTGGAGCTATCCAGGAATCAAGGATTTCAGTTGTTGTTTTCTCTGAAAACTATGCATCTTCCTCTTGGTGTCTTGATGAACTTGTCCAGATAGTTGAGTGTATGGAGATGAAGAACCATTTGATTTGGCCAATCTTTTACAAAGTGGCACCATCTGATATAAGGCATCAAAGAAATAGTTATGCTGAAGCCATCACTGAACATGAAAATAGGTTCGGAAAAGAGTCTAAAAAGGTGCAAAAATGGCGATCAGCTTTGTCTCAAGTTGCCAACTTGAAAGGGTGGCATTTCGAAACTGGGTACGAATATGAATTTATCCAAAAGTTTGTTGAAATGGCTATTGCTAAATTACGTCAATCTTTTTGTAACTACGATGTTTTTCTTAGTTTTAGAGGAGAAGACACCCGTCACACTTTCACGGGTCATCTCTATGATGCTTTCCGAAGGAAGGGAATCAACATATTCATGGATGATGATGGATTGAAGGGTGGGGACCAAATTGCACTCTCTCTTGTTCGAGCTATTCAGGAATCAAGGATTTCAGTTGTTGTTTTCTCTGAAAACTATGCATCTTCCTCTTGGTGCCTTGATGAACTAGTTGAGATTGTTGGGTGTATGAAGATGAAGAACCAATTGGTTTGGCCAATCTTTTACAAAGTGGAACCATCGGATATTAGATATCAGAGAAATAGTTATGCTGAAGCTATGACTAAACATGAACGTAGGTTTGGAAAAGAGTCTGAAAGGATGCAGAAATGGCGATCAGCTTTGTCTCAAGTTGCCAACTTAAAAGGATGGCATTTCGAAACTGGGTATGAATATGAATTTATCCAAAAGTTTGTTGAAATGGCCATTGCTGAATTACATCATGAACAATTAGATGTTGGTGAGCACATAGTTGGACACCAGTCTTGCATACAGGAAGTGAGGTCACTTTTACATATTGAATCTCGTGACAAGGTTTGCATGGTGGGAATTCATGGAACAGGTGGAATAGGGAAGACAACACTTGCCAAAGCTCTATATAACATGATTTTTTATCAATTTGAATGTGCAATTTTTCTTGAAAGTGTTAGAGAAACATCAAAGCAAATGGGGCTTGTACATCTTCAAGAGACAATGCTATCTAAGCTGCTTGAAGGGAAAATTATCAAGTTAAGCAGTGTAGATGAAGGTGCCGCTAGATTGAAAGACAGGCTTCGGCATAGGAGAATTCTTCTGGTGCTTGATGATGTAGATAGTGTGGACCAGTTAGAAAAACTAGCAGGAAATTGTAATTGGTTTGGTTCAGGTAGCAGAATCATTATAACAACAAGGGATAAGCATGTGTTAACTATTCATGAGGTTGAAAAGAGATATGAAATGAAAGAGTTGAATGATCATGAAGCTCTTCAACTTTTTTGCTGGAAGGCCTTCAAAATGAGTCAACCGGCAACCAGCTATGAAGATGTGTCTAACCGTGCAGTTCGTTATGCCAGAGGCCTTCCATTGGCATTAAAAGTAATTGGCTCCAATTTGGTTGGCAAATCCATAAGGGAATGTGAATGTGCATTGGAACAATACGAGAGGATTCCGGATAGAAAGATACAAGACATACTCAAGGTAAGCTATGATTGCCTATCAGAGAATGCACAGTATGTCTTCCTTGATATTGCTTGCTTCTTTAAAGGGGAGAGAAGAGAATATGTTGAAAGAATTTTAGACAAATGTGACTTTTACCCAACATACAATATTGGAATACTTGTTGACAAATCTCTTCTTACTGTTGATCAATATGGTCACTTAAGGATGCATGATCTAATACAAGACATGGGCAAAGAAGTAGTTAGACAGGAATCGCCAAGAAGACCTGGTGAACGTAGCAGGTTATACTTTCATGAAGATGTTCTCAATGTTTTAACAGAAAATTCAGGAAGCAGTACTATTGAAGGAATACTGTTAGATCCACCGAAGGAAGAAGAAGTTGAAGTAGAGTGGGGTGGCATTGCCTTCGAAAAGATGAGTAATCTTCGAATTCTGGTTGTGAGGAATGCACACTTTTTATCAGCACCTAAATATCTGCCAAGTAGTCTAAGGTTGCTTGAATGGAAGGGTTACCCATCAGAATCACTCCCACCAGGATTTTATCCAAGGAATGTTGTTGTCTTAAGTTTACCACATAGTCATTTCAAACTAGAAAAGGAAAATAAATTCCCGAAACTCAAGCATTTGACTGAACTGAATTTCTCTTATTGTCGATTCATAACTCATCTACCTGATGTGTCTGGAGTTCCATCTTTAAAGCACATAAAACTTATTGCATGTAGAAAACTGATTTCGATTGATGAATCTGTTGGATTTCTTGAGAAGCTTGAAAGTTTAGATGCAAGAGAATGTGGCAAGCTAAGAAAATTCTCATCAAGAATCTGGTTGCCATCTCTCCAACTTCTCAACTTTGAATTTTGTAACAATTTGCAATCATTCCCTGAAATAGAGAAAGTGATGGATAAGCCCTTAGACATTTGTTTAAATGATACTAAAATTAGGGAGTTGCCAAGTTCTGTGTATAATCTTATGGGACTCAAAACTGTAAGTATGTCAGCATGTAGAAGAGTGAGAAATCTACCAAGTACCTTATTTATGTTGCCAAGGATTGTTGAGTTGAAGTTTCAGGGCAATTTTCAAGTTCGAAAATCATTTAGAAGCTTCCGAAATAGCCATGTAATAACAACCATTAGCCACTCTCCTTTACGACGATTGTCATGTATAAATTGTGGTTTAACAGATGAAGATCTCCAATTTATTCTTAGTTGTTTTCCAAACTTGGAAGAGCTAATATTGCCATGGAACAATTTTAAGTCTCTCCCTACATCCATTAAAGAATCTTCTAACTTGACAGTTCTTGATGTAATTGGTAACGAGAGACTTAAGGAAATTCCAGAGTTGCCATCAAGTATTCAGATAGTATTGGCTAGAGGTTGTTCATCCTTAACTTCAGAAACATCAAGAATGTTATGGTCTCAGGCATTGAAGGAAGTCTATAAATTACATGTTTTGATGCCAGAAAGCCAGTTTCCAAATTGGTTTGATCATCAATATGAAGGTGGAATTGTGTCCTTTTGGGCTCGTGGACAATTTCCCATCGTTGCTTTAGCTTTTCTCTTCAAAGACATGCCACTACCACCCCGAATTCTAGTTAATCATAGCATTCGTATTCACTTGTACATTAATGGACGAGAAGTGGTTAAATTAAGTTGGTCTGGGTATGGACTTGAAGGAGACCATGTGTTCCTATGTGATGTACGATCTGGGGTTGGTGCTGAAGAGTGGCCAATTCGTGACATGTTGCATGCATCTGATTGGAATCATGTGGAGTTTAAATGTGATTCACCTGCAGGTTTGATCGTGAGTTATTGTGGTGTTCACGTGTATAAACAAGAAACTAACATGCAAGATATTCAATTCACACGTCCCAACCCATTGAAGAGAAAACCATCAATAACAAGTCATAAACTACCGAAGAAGCGTGTGAGAATGCTCAAGTCTAACATAGACAAGAGAAAGACACCAAGGAAATTTACTCAGTTATCTTCTGGGAGAAGAATGAAAATGGTATTTCCTATGAATAAAGGTTTTTGGAGATTTTCCTATGGCTTTAGTATGTCAAAGAAGAACTAG 3705 0.3792 MDDDGLKGGHQISLSLVGAIQESRISVVVFSENYASSSWCLDELVQIVECMEMKNHLIWPIFYKVAPSDIRHQRNSYAEAITEHENRFGKESKKVQKWRSALSQVANLKGWHFETGYEYEFIQKFVEMAIAKLRQSFCNYDVFLSFRGEDTRHTFTGHLYDAFRRKGINIFMDDDGLKGGDQIALSLVRAIQESRISVVVFSENYASSSWCLDELVEIVGCMKMKNQLVWPIFYKVEPSDIRYQRNSYAEAMTKHERRFGKESERMQKWRSALSQVANLKGWHFETGYEYEFIQKFVEMAIAELHHEQLDVGEHIVGHQSCIQEVRSLLHIESRDKVCMVGIHGTGGIGKTTLAKALYNMIFYQFECAIFLESVRETSKQMGLVHLQETMLSKLLEGKIIKLSSVDEGAARLKDRLRHRRILLVLDDVDSVDQLEKLAGNCNWFGSGSRIIITTRDKHVLTIHEVEKRYEMKELNDHEALQLFCWKAFKMSQPATSYEDVSNRAVRYARGLPLALKVIGSNLVGKSIRECECALEQYERIPDRKIQDILKVSYDCLSENAQYVFLDIACFFKGERREYVERILDKCDFYPTYNIGILVDKSLLTVDQYGHLRMHDLIQDMGKEVVRQESPRRPGERSRLYFHEDVLNVLTENSGSSTIEGILLDPPKEEEVEVEWGGIAFEKMSNLRILVVRNAHFLSAPKYLPSSLRLLEWKGYPSESLPPGFYPRNVVVLSLPHSHFKLEKENKFPKLKHLTELNFSYCRFITHLPDVSGVPSLKHIKLIACRKLISIDESVGFLEKLESLDARECGKLRKFSSRIWLPSLQLLNFEFCNNLQSFPEIEKVMDKPLDICLNDTKIRELPSSVYNLMGLKTVSMSACRRVRNLPSTLFMLPRIVELKFQGNFQVRKSFRSFRNSHVITTISHSPLRRLSCINCGLTDEDLQFILSCFPNLEELILPWNNFKSLPTSIKESSNLTVLDVIGNERLKEIPELPSSIQIVLARGCSSLTSETSRMLWSQALKEVYKLHVLMPESQFPNWFDHQYEGGIVSFWARGQFPIVALAFLFKDMPLPPRILVNHSIRIHLYINGREVVKLSWSGYGLEGDHVFLCDVRSGVGAEEWPIRDMLHASDWNHVEFKCDSPAGLIVSYCGVHVYKQETNMQDIQFTRPNPLKRKPSITSHKLPKKRVRMLKSNIDKRKTPRKFTQLSSGRRMKMVFPMNKGFWRFSYGFSMSKKN* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1727 1234 SUPERFAMILY L domain-like 626 1016 - -
Apr9g1727 1234 Gene3D - 137 308 IPR035897 -
Apr9g1727 1234 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 129 - -
Apr9g1727 1234 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 136 1169 - -
Apr9g1727 1234 ProSiteProfiles TIR domain profile. 138 304 IPR000157 GO:0007165
Apr9g1727 1234 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 1169 IPR044974 GO:0006952
Apr9g1727 1234 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 129 IPR044974 GO:0006952
Apr9g1727 1234 Pfam NB-ARC domain 325 529 IPR002182 GO:0043531
Apr9g1727 1234 Gene3D - 1 136 IPR035897 -
Apr9g1727 1234 ProSiteProfiles TIR domain profile. 1 133 IPR000157 GO:0007165
Apr9g1727 1234 PRINTS Disease resistance protein signature 339 354 - -
Apr9g1727 1234 PRINTS Disease resistance protein signature 415 429 - -
Apr9g1727 1234 PRINTS Disease resistance protein signature 508 522 - -
Apr9g1727 1234 PRINTS Disease resistance protein signature 795 811 - -
Apr9g1727 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 312 567 IPR027417 -
Apr9g1727 1234 Gene3D - 473 557 IPR042197 -
Apr9g1727 1234 SUPERFAMILY Toll/Interleukin receptor TIR domain 138 282 IPR035897 -
Apr9g1727 1234 Gene3D Ribonuclease Inhibitor 677 847 IPR032675 -
Apr9g1727 1234 Gene3D Ribonuclease Inhibitor 848 1031 IPR032675 -
Apr9g1727 1234 CDD AAA 316 456 - -
Apr9g1727 1234 Gene3D - 309 469 IPR027417 -
Apr9g1727 1234 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 111 IPR035897 -
Apr9g1727 1234 SMART till_3 1 108 IPR000157 GO:0007165
Apr9g1727 1234 SMART till_3 139 279 IPR000157 GO:0007165
Apr9g1727 1234 Pfam TIR domain 2 126 IPR000157 GO:0007165
Apr9g1727 1234 Pfam TIR domain 139 297 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1727 Apr-Chr9 26414157 26419623 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1727 103 978 WRKY Transcription Factor Family AT4G12020 31.173 1.45e-100 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1727 - - aprc:113846827 2126.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1727 9 26414157 26419623 Apr9g1727 9 26414157 26419623 ECH