Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1719 ATGAGCTTCTTTTCATGTTGTACGTCACAAGAGAAGACCAACAAGAACTCATCCAAGAGGAGCAGTAAGGACTATAGTCACACAAAAGCTCTACCATCATTTGCCAACATGTGTTTCAAAACTGATAGCAGCAAGCGGAAGTACATAGAAGAAGAAATAGCCAAAATTGGAAAAGGAAATATTACCTCTCAGATTTTTTCTTATCATGAACTATGCGTTGCAACTCGTAACTTTCATCCTGATAATATGATCGGTGAAGGTGGCTTTGGGAGGGTATACAAAGGACGCATTAAAAGCATAAATCAGGTTGTTGCTGTGAAGCAACTTAACAGGAATGGATTCCAAGGAAACAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTAACCTTGTCAATTTGGTAGGATATTGTGCTGATGGTGATCAAAGGATTTTGGTATATGAGTACATGGTGAACGGCTCTTTAGAAGATCACCTTCTTGAACTACCTCCGAACAGAAAGCCTTTGGACTGGCGTACTAGAATGAACATTGCAGCAGGTGCAGCAAAAGGACTTGAATATTTACATGAAGTAGCAAATCCCCCAGTGATATATCGTGATTTCAAAGCATCAAACATACTATTAGATGAAAACTTCAACCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACACATGTATCCACAAGGGTGATGGGAACATATGGCTACTGTGCACCTGAGTATGCCTCAACAGGTCAATTGACTACAAAATCAGATGTATACAGCTTTGGTGTTGTGTTTCTAGAGATGATCACAGGAAGAAGAGTAATTGATCAATCAAGACCATCTGAAGAACAAAACTTAGTCACTTGGGCACAACCACTATTCAAAGACAGAAGAAAATTTATATCAATGGCTGATCCATTGCTAAAAGGGAACTACCCAACAAAGGGTCTATACCAAGCACTAGCAGTTGCAGCAATGTGTCTTCAAGAGGAAGCTGATACTCGACCTTTGATTAGTGACGTGGTTACAGCCCTTGAAGTTCTAACGAAGAAGCATGTCCAAGTGGGTAAACAACAACGTATAAGAGAGACATATTTTGAGGATGGGGAATGCAGTTGA 1140 0.4 MSFFSCCTSQEKTNKNSSKRSSKDYSHTKALPSFANMCFKTDSSKRKYIEEEIAKIGKGNITSQIFSYHELCVATRNFHPDNMIGEGGFGRVYKGRIKSINQVVAVKQLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGDQRILVYEYMVNGSLEDHLLELPPNRKPLDWRTRMNIAAGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVFLEMITGRRVIDQSRPSEEQNLVTWAQPLFKDRRKFISMADPLLKGNYPTKGLYQALAVAAMCLQEEADTRPLISDVVTALEVLTKKHVQVGKQQRIRETYFEDGECS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1719 379 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1719 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Apr9g1719 379 MobiDBLite consensus disorder prediction 1 25 - -
Apr9g1719 379 MobiDBLite consensus disorder prediction 1 15 - -
Apr9g1719 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Apr9g1719 379 SUPERFAMILY Protein kinase-like (PK-like) 64 359 IPR011009 -
Apr9g1719 379 CDD STKc_IRAK 84 353 - -
Apr9g1719 379 Gene3D Transferase(Phosphotransferase) domain 1 155 376 - -
Apr9g1719 379 PANTHER OS07G0668900 PROTEIN 1 379 - -
Apr9g1719 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Apr9g1719 379 Pfam Protein kinase domain 79 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1719 379 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1719 Apr-Chr9 26347474 26349981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1719 1 355 Glycoside Hydrolase AT3G07070 63.889 1.43e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr9g1719 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1719 - - gmx:100798032 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0141 2 2036757 2039863 Apr9g1719 9 26347474 26349981 ECH
Apr9g1719 9 26347474 26349981 Apr9g1719 9 26347474 26349981 ECH
Apr2g0141 2 2036757 2039863 Apr9g1719 9 26347474 26349981 PCT