Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1711 ATGATTTGCGCTTTGAAGCAACCTGGTATATCTATCAGAGGTTCTGATGTTGTTCTCCGGAACAAGGGTTTAACTTTACCTCCAGTTAAGTCATGTTCCCTTGTTCTACCTTCCCTCCCAAGGGAAAAACCTCAGAGATCCCTGGTGTCAGTGCAAAATCCACTGCTCCTTTCTTGCATTGGTTTTGGGAATTTTGTTGGGTCAGTGAAGCGTGAGCGTAGTGATTTGGTAACGTGTGGAGCGTATGAGGCTGATAGATCAGAGGTTGAAGGAGCTGATGCTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACCTGGTGGGCGCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGCTGAATGCATACCCCTACCCTTGGCTTACTTCAACTCTTTCTCTTGCATGTGGGTCTCTTATGATGTTGATCTCATGGGCCACCCGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTCTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATTGGACATGTAGCGGCAACCGTTAGCATGTCAAAAGTTGCAGTATCATTCACCCATATCATCAAGAGTGGTGAGCCTGCTTTCAGTGTACTGGTTTCCAGATTTCTTCTGGGTGAGACCTTCCCAGTGCCTGTCTATCTGTCTTTGATTCCGATCATTGGTGGCTGTGCTCTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGCATGAAGGGAAAGGCTGTTAGTGGAATGAATTACTACGCTTGTTTATCTATGTTGTCCTTGTTAATTCTCACACCATTTGCGATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCTCTCTCTCAAATTGGACCCCAATTTATATGGTGGGTGGCAGCTCAGAGCATATTTTATCATCTATACAATCAAGTGTCGTACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCGATCATTATCTTCCACACACCAGTTCAGCCAATTAATGCTCTTGGAGCTGCTATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAACAGTAG 1188 0.4402 MICALKQPGISIRGSDVVLRNKGLTLPPVKSCSLVLPSLPREKPQRSLVSVQNPLLLSCIGFGNFVGSVKRERSDLVTCGAYEADRSEVEGADAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSMLSLLILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1711 395 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
Apr9g1711 395 PANTHER SOLUTE CARRIER FAMILY 35 60 394 - -
Apr9g1711 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 238 - -
Apr9g1711 395 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
Apr9g1711 395 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 60 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1711 Apr-Chr9 26295509 26299681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1711 33 394 Antiporters AT5G54800 80.759 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1711 K15283 - gmx:100801832 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0129 2 1899242 1903046 Apr9g1711 9 26295509 26299681 ECH
Apr9g1711 9 26295509 26299681 Apr9g1711 9 26295509 26299681 ECH