Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1707 ATGGAACCCAAGTTGGTCCTCGTTTTACTTCTCCTTGCTTCCACTTCATTACCTTTTCTCTCACACTTGCAATTGGCTTCAGCTGCCACACCCAAGCTCAGCACTCAAGAGGTGATGGCATTGAAGGAGATAGGGAGGAAGATAGGGAAGAAAGATTGGGATTTTGGGGTGGAACCATGCAGTGGAAAAGGGAATTGGAATGTGTCAGATAATAGGAAAGGCTTTGAGAGTTCTGTGATTTGTGATTGTTCCTTTAATCACAATACTTCTTGCCGTGTTGTAAGCATATCCTTGAAGGCCCAGAATCTCTCTGGTACACTCTCACCAGAGTTTTCCAAGCTTCGTTATCTCAAAATATTGGACCTTAGTCGTAACATCATCACTGGTTCTATACCTCAACAATGGGCTACCATGAAATTGGTTGAGCTCTCTTTCATGGGAAACAGATTATCAGGGCCATTCCCCAAAGCTCTCACCAATATTACAACCCTCAGAAACTTGAGTATTGAAGGAAATCAATTTTCAGGCTTCATTCCGATGGAGATTGGGAAGTTGATCAATTTAGAAAAACTCATTCTGTCATCCAATGCATTCACAGGAGCATTGTCATCCGCACTTTCCAAGTTGACCAACTTGACTGATTTGAGGATAAGCGACAATAATTTCTCGGGTAGGATACCTGATTTCATTAGTAAATGGACATTGATTGAAAAGCTGCACATTCACGGTTGCTCTCTTGAGGGGCCCATACCTTCTAGCATTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAGAAGGTAGTAAAAGCTCTGCTTTCCCACCACTAAGCAATATGAAATCCATGAAGACACTGGTATTGAGAAAATGCATGATTAAAGGAGAGATCCCGGATTATATTGGCAGCATGGAGAAACTGAAAATTTTAGATTTGAGTTACAATGGTTTGAGTGGAAAAATACCTGAATCTTTTGCGCAACTTGACAAAGTGGACTTCATGTATCTTACTGGGAACAAGTTATCAGGGACTATACCTGGCTGGGTCCTTGAAAATAACAAAGCTATTGATGTCTCTGACAATAACTTCTCCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGGAACATAAACCTTGTTGAGAGCTACTCTTCATCTGCGGATACACAAAGTAAGATTCATTCATGCCTAAAAAGGACCTTTCCATGCCCTGCTTCATACTCCCTCCACATCAATTGCGGTGGTAAGGAAGCAAATATTAGTGGTCATATTTATGAAGCTGACAAAGAACGAAAAGGAGCTTCAATGTTATACACTGCCCAGGATTGGGCTCTTAGTAGCACTGGAAACTTCATGGACAATGATATTGACTCTGATCCCTATATTGTGGCCAATACTTCTAGACTTAATGTCTCTGTACTCAACTCACAACTATACACAACAGCTCGTGTTTCTCCCCTTGCTCTCACATACTATGGCCTCTGCCTAATGAATGGAAAATACACTGTTAAGCTTCACTTTGCAGAGATTACTTTCATCAATGATAGGTCATTTAACAGTCTTGGGAGGCGTGTATTTGATGTCTACATCCAGGGGAAATTAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGAGAAGCCACTTGTGAAGACATTTAATGCTACTGTTACTCAACATACTCTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATACCCACAAGAGGAGTCTATGGACCTCTAATATCTGCTATTTCGGTAGACCCTAATTTTAAACCTCCATCAGCAGAGGATGGCAACAGAACTTATGTCATACTGGCAGCTAGCATAGTTGCTGGTGCTGTAGTTGTTCTTCTTCTGGTGCTGGTTATCATGAGGAGGAAGGGATGGTTAGGAGGCAAAGACCCAGTATATAAAGGTATGGTCTTATGCTTTCATGTTGAATCCAAATTTTCACTCTTTTTTCTAGAGCTTAGGGGTATAGATCTGCAGACAGGATTATTTACGTTAAGACAAATCAAAGCAGCAACCAAAAACTTTGATGCAGCAAATAAAATTGGTGAAGGTGGTTTTGGTTCTGTTTACAAGGGCCTACTATCAGATGGTACAGTAATTGCAGTAAAGCAACTCTCTTCAAAATCTAAACAAGGAAATCGTGAGTTTGTGAATGAGATAGGAATGATATCCGGACTTCAACATCCTAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGGAACCAACTAATACTGATATATGAGTATATGGAAAATAATTGTCTATCCCGCATTCTTTTTGGGAAGGATCCAAACTGCAGAATGAAACTAGACTGGCAAACCAGGAAGAAAATTTGCCTTGGTATAGCTCAAGCCTTGGCTTATCTACATGAAGAGTCCAGAATAAAGATCATACATAGGGATATAAAGGCAAGTAATGTGTTGCTCGATAAGGACTTTAATGCTAAAGTCTCAGATTTTGGCTTGGCAAAACTTATTGAAGAGGACAAAACCCATATTAGCACTCGAATTGCAGGAACAATTGGTTATATGGCCCCTGAGTATGCAATGCGTGGGTATCTAACTGACAAAGCAGATGTCTACAGCTTCGGGGTGGTTGCATTAGAAACTGTCAGCGGAAAGAGCAATACAAATTACAGGCCTAACGAAGATTTTGTTTACCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGAAGTCTTCTGGAGCTGGTTGATCCAGATTTGGGTTCAGAATATTCAACTGAGGAGGCCATGATAGTCCTAAACGTGGCTCTCTTATGTACCAACGCATCTCCGACACTTAGACCAACAATGTCCCAAGTTGTGAGCATGCTTGAAGGTTGGACTGACATTCAGGATCTACTTTCTGATCCGGGATATTCAGCTGTTAGTTCCAGTTCCAAATATAAGAGTATAAGAAATCACTTCTGGCAGAATCCAAGCGGAACACACAGTATGTCAATACCTAGTATATATACGAATTCCTCTAGTTCACATGTTGAAAAAGAAAAGAGCTACCATCTTGTAACCAATAATCCAGATACATCAGACACGTGA 3108 0.4086 MEPKLVLVLLLLASTSLPFLSHLQLASAATPKLSTQEVMALKEIGRKIGKKDWDFGVEPCSGKGNWNVSDNRKGFESSVICDCSFNHNTSCRVVSISLKAQNLSGTLSPEFSKLRYLKILDLSRNIITGSIPQQWATMKLVELSFMGNRLSGPFPKALTNITTLRNLSIEGNQFSGFIPMEIGKLINLEKLILSSNAFTGALSSALSKLTNLTDLRISDNNFSGRIPDFISKWTLIEKLHIHGCSLEGPIPSSISALTRLSDLRITDLEGSKSSAFPPLSNMKSMKTLVLRKCMIKGEIPDYIGSMEKLKILDLSYNGLSGKIPESFAQLDKVDFMYLTGNKLSGTIPGWVLENNKAIDVSDNNFSWDSSSPTECQRGNINLVESYSSSADTQSKIHSCLKRTFPCPASYSLHINCGGKEANISGHIYEADKERKGASMLYTAQDWALSSTGNFMDNDIDSDPYIVANTSRLNVSVLNSQLYTTARVSPLALTYYGLCLMNGKYTVKLHFAEITFINDRSFNSLGRRVFDVYIQGKLVLKDFDIQREAGGTEKPLVKTFNATVTQHTLKIHFYWAGKGTTGIPTRGVYGPLISAISVDPNFKPPSAEDGNRTYVILAASIVAGAVVVLLLVLVIMRRKGWLGGKDPVYKGMVLCFHVESKFSLFFLELRGIDLQTGLFTLRQIKAATKNFDAANKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRILFGKDPNCRMKLDWQTRKKICLGIAQALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEEDKTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETVSGKSNTNYRPNEDFVYLLDWAYVLQERGSLLELVDPDLGSEYSTEEAMIVLNVALLCTNASPTLRPTMSQVVSMLEGWTDIQDLLSDPGYSAVSSSSKYKSIRNHFWQNPSGTHSMSIPSIYTNSSSSHVEKEKSYHLVTNNPDTSDT* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1707 1035 Pfam Leucine rich repeat 285 343 IPR001611 GO:0005515
Apr9g1707 1035 SUPERFAMILY L domain-like 80 366 - -
Apr9g1707 1035 Gene3D - 408 599 - -
Apr9g1707 1035 ProSiteProfiles Protein kinase domain profile. 690 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1707 1035 SUPERFAMILY Protein kinase-like (PK-like) 674 989 IPR011009 -
Apr9g1707 1035 SMART serkin_6 690 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1707 1035 CDD STKc_IRAK 696 964 - -
Apr9g1707 1035 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524
Apr9g1707 1035 Gene3D Transferase(Phosphotransferase) domain 1 766 974 - -
Apr9g1707 1035 Gene3D Ribonuclease Inhibitor 197 270 IPR032675 -
Apr9g1707 1035 Gene3D Ribonuclease Inhibitor 271 379 IPR032675 -
Apr9g1707 1035 Pfam Malectin domain 411 595 IPR021720 -
Apr9g1707 1035 Gene3D Phosphorylase Kinase; domain 1 666 765 - -
Apr9g1707 1035 Gene3D Ribonuclease Inhibitor 50 196 IPR032675 -
Apr9g1707 1035 Pfam Protein tyrosine and serine/threonine kinase 693 962 IPR001245 GO:0004672|GO:0006468
Apr9g1707 1035 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 1006 - -
Apr9g1707 1035 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 70 1006 - -
Apr9g1707 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1707 Apr-Chr9 26262386 26271629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1707 215 1026 Receptor kinase-like Gene Family AT1G07650 63.592 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr9g1707 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1707 - - gmx:100784864 1713.74