Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1703 ATGGATACCAACAAACTTCACCCTCGCTTCTCACTCGGCCGTCAATCCTCTCTGGCGCCTGAACGCGACAACGCCGCCGCCGCCGAGCCGTCTGAGGCGCTCGACCCCGCCGTTCGGTTGATGTATTTGGCCAACGAAGGAGATTTGGATGGGATTAACGAGTTGTTGGACGCTGGCAGTGACGTCAATTTCAGAGACATTGATGGCCGCACCGCTCTTCACGTCGCCGCCTGTCAGGGACGCACTGACGTAGTCGATTTGTTGCTCCGACGAGGTGCCGGCGTCTATCCTCAAGACCGCTGGGGCAGCACTCCTCTTGCTGATGCAATGTACTACAAAAATCATGACGTTGTGAAGCTTTTGGAGAAACACGGTGCAAAACCCCCGATGGCTCCTATGCATGTCCAGAGTGCTCGTGAAGTTCCAGAATACGAGATTGATCCTTCTGAACTTGATTTTACTAATAGCGTTTGCATAACAAAGGGAACTTTCCGGATTGCATTATGGCGTGGAACTCAAGTTGCAGTCAAAACATTTGGGGAGGAAGTTTTCACTGATGCTGATAAAGTGAAGGCATTTCATGACGAGCTTACATTACTTCAGAAAATAAGGCATCCAAATGTAGTCCAGTTTTTAGGTGCTGTGACACAAAGCTCCCCAATGATGATTGTCACAGAGTATCTACCCCAGGGGGATCTTTGTGCCTATTTGGAGCGCAAAGGGGCATTAAAACCGGTAACAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGAATGAACTATTTGCATGAACATAAACCAGAGGCCATTATACATCGAGATCTTGAGCCTTCAAATATACTACGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTCAAAGTTGCTAAAACAGTCAAGGAAGACAAACCCGTGACATGCCAGGATACATCATGGCGCTATGTTGCTCCAGAGGTCTATAGAAATGAGGAATATGACACAAAAGTTGATGTGTTTTCATTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCCACCATTTTATGCAAAGCCAGAAAATGAAGTTCCAAAAGCCTATGTTGAAAATGAGCGTCCACCATTTAGAGCTTCACCAAAGCTTTATGCTTATGGACTAAAACAGTTAATTGAGGAATGTTGGGATGAAAAACCATACAGAAGACCAACATTTAGGCAAATAATTGGGAGATTGGAAGACATCAGCAGCCATCTTGCTCGAAAGAGGCACTGGAAGGTTCGGGCTCCTGGATGCATTCTGAATCTGGGGGCCCTATTTAGAGGCTATCGCACAAATCCAAGTAGCCGATCATCTCGCTCTACGACCAGATAA 1368 0.4649 MDTNKLHPRFSLGRQSSLAPERDNAAAAEPSEALDPAVRLMYLANEGDLDGINELLDAGSDVNFRDIDGRTALHVAACQGRTDVVDLLLRRGAGVYPQDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPMAPMHVQSAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTQVAVKTFGEEVFTDADKVKAFHDELTLLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLCAYLERKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYAKPENEVPKAYVENERPPFRASPKLYAYGLKQLIEECWDEKPYRRPTFRQIIGRLEDISSHLARKRHWKVRAPGCILNLGALFRGYRTNPSSRSSRSTTR* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1703 455 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 437 - -
Apr9g1703 455 Gene3D - 11 143 IPR036770 -
Apr9g1703 455 ProSiteProfiles Protein kinase domain profile. 153 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1703 455 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 437 - -
Apr9g1703 455 SUPERFAMILY Ankyrin repeat 39 132 IPR036770 -
Apr9g1703 455 Pfam Protein tyrosine and serine/threonine kinase 170 409 IPR001245 GO:0004672|GO:0006468
Apr9g1703 455 PIRSF ILK 2 432 - -
Apr9g1703 455 MobiDBLite consensus disorder prediction 1 30 - -
Apr9g1703 455 SUPERFAMILY Protein kinase-like (PK-like) 158 410 IPR011009 -
Apr9g1703 455 ProSiteProfiles Ankyrin repeat profile. 68 100 IPR002110 GO:0005515
Apr9g1703 455 Pfam Ankyrin repeats (3 copies) 40 128 IPR002110 GO:0005515
Apr9g1703 455 Gene3D Phosphorylase Kinase; domain 1 146 228 - -
Apr9g1703 455 Gene3D Transferase(Phosphotransferase) domain 1 229 427 - -
Apr9g1703 455 CDD STKc_MAP3K-like 167 410 - -
Apr9g1703 455 ProSiteProfiles Ankyrin repeat region circular profile. 68 95 - -
Apr9g1703 455 SMART ANK_2a 35 64 IPR002110 GO:0005515
Apr9g1703 455 SMART ANK_2a 68 97 IPR002110 GO:0005515
Apr9g1703 455 SMART ANK_2a 101 130 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1703 Apr-Chr9 26243242 26249350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1703 1 425 MAP Kinase Kinase Kinase AT4G18950 66.743 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Apr9g1703 PK_Tyr_Ser-Thr 4.1e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1703 9 26243242 26249350 Apr5g0999 5 14619189 14627790 PCT