Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1688 ATGGTGTTCCCAATGGTGCTCCTAAGGCTTGTAGATTGGGTCTTGTATCAGTTGCTTGCTAACTCATGTTATAGAGCAGCAAGGAAAATGAAAAGTTATGGGTTTCATTTGGGCTATTTGTCATCAAAACCACCCCATCAACCGTGTTCTTTTCCTAGCATAACCAAATGTGATTTGGAGGATAGAGGGTCCCAAACTCTTGCTTGTGACATTCATAGCGTCTTGTTAAGGTCACACTCTTTCTTTCCTTATTTCATGCTGGTTGCCTTTGAAGGTGGCAGCATTTTCAGGGCATTTCTCTTGCTTTTGTCTTGTCCTGTGCTGTGGATTTTAGACCATGAGGTAAAGCTCAGGGTCATGACCTTCATCACCTTTTGTGGGCTAAGAATAAGTGACATGGAAAGTGTTTCAAGGGCTGTTTTGCCAAAGTTTTATTTAGAGAATCTCAACCTTCATGCTTATGAGGTTCTGGCTTCAGCAGGGTCCAAAGTTGTCTTCACAAGTGTGCCTAGAGTTATGGTAGAAGGTTTTCTCAAGGAGTACTTGAGTGTCGGCGCTGTTATGGGCACAGAGTTGCACACTGTTGGTTGCTACTTCAGTGGCTTGCTCTCAGGTTCTGGCTTACTTGTCAAGCACAGAGCACTAAAGGATTATTTTGGAGATAGAAAGCCTGATATTGGAATCGGAAGCTCAAGTGTTCATGATCATCTTTTTATCTCACTTTGCAAGGAATCTTATGTGTTGAACAATGAAGAGGGCAAGAACAATTCAAGCTCAGTGATGCCAAGGGACAAGTATCCAAAGCCCCTAATATTTCATGATGGAAGACTAGCATTCCTGCCTACTCCCTCAGCAACTCTCTACATGTTTATGTGGCTTCCAATTGGAATTCTTTTGGCCATTTATAGAATCCTTTTGGGTATTTTATTTCCATATGGATGGGCAATGACATTAGGAGTTTGGAGTGGCATAGATTTGCATGTCAAAGGTTGTAGCCTTGAAAAATCAAAGGAAAACAAAGGGGTCCTCTATGTTTGCTCCCACAGGACTCTCCTTGATCCTGTTTTCCTTAGCACATGCTTGGCTAAGCCTTTGACTGCAGTCACATATAGCTTAAGCAAGGTGTCAGAATTGATAGCCCCTATTAGAACAGTGAGACTAACAAGGGACAGAAAACAAGATGGTGAAACCATGCAAAGGCTTCTAAGAGAGGGTGATTTGGTGGTGTGTCCTGAAGGAACAACTTGCAGGGAACCATATTTATTAAGGTTCAGCTCACTGTTTGCAGAATTGGCTGATGAGATTGTGCCTGTGGCTGTGAATGCTCATGTGAGCATGTTCTATGGGACCACTGCTAGTGGGTTGAAATGCTTAGACCCTATTTTCTTTCTCATGAATCCAAGGCCTAGCTATTACATTCATATTCTTGGAAAGGTTCCTAAAGAACTTACATGTGCTGGAGGAAGACCAAGCTGTGAAGTTGCAAACTATATACAGAAACAGTTAGCTAATGCTTTGGGATTTGAGTGTACCACACTCACAAGGAGAGATAAGTACATGATGCTAGCAAGGACTGAAGGTATTGTAAAAGAGGATAAGTGGAGTTGA 1608 0.4223 MVFPMVLLRLVDWVLYQLLANSCYRAARKMKSYGFHLGYLSSKPPHQPCSFPSITKCDLEDRGSQTLACDIHSVLLRSHSFFPYFMLVAFEGGSIFRAFLLLLSCPVLWILDHEVKLRVMTFITFCGLRISDMESVSRAVLPKFYLENLNLHAYEVLASAGSKVVFTSVPRVMVEGFLKEYLSVGAVMGTELHTVGCYFSGLLSGSGLLVKHRALKDYFGDRKPDIGIGSSSVHDHLFISLCKESYVLNNEEGKNNSSSVMPRDKYPKPLIFHDGRLAFLPTPSATLYMFMWLPIGILLAIYRILLGILFPYGWAMTLGVWSGIDLHVKGCSLEKSKENKGVLYVCSHRTLLDPVFLSTCLAKPLTAVTYSLSKVSELIAPIRTVRLTRDRKQDGETMQRLLREGDLVVCPEGTTCREPYLLRFSSLFAELADEIVPVAVNAHVSMFYGTTASGLKCLDPIFFLMNPRPSYYIHILGKVPKELTCAGGRPSCEVANYIQKQLANALGFECTTLTRRDKYMMLARTEGIVKEDKWS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1688 535 SMART plsc_2 342 443 IPR002123 GO:0016746
Apr9g1688 535 PANTHER ANCIENT UBIQUITOUS PROTEIN 19 532 - -
Apr9g1688 535 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 280 529 - -
Apr9g1688 535 CDD LPLAT 323 503 - -
Apr9g1688 535 Pfam Acyltransferase 330 435 IPR002123 GO:0016746
Apr9g1688 535 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 19 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1688 Apr-Chr9 26121427 26123398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1688 1 530 Acyl Lipid Metabolism Gene Families AT1G06520 59.354 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1688 K13508 - gmx:100803875 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1688 9 26121427 26123398 Apr2g0086 2 1355661 1358060 PCT