Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1685 ATGCAGGAGCCCCTCCTAAGCCCTTGCTCCAGCAGAGGATTAGCCTCACCAAGCGGAACATCATCACCCAATGAACAATCTTTCCATGATCTTGCCCCATCACCGCTCCAATCTCCTCCTTATATCATCAATGAAGCAAGGAGCCCTTCTAATGCTAACTTGAGCTTGAAGAAAAGGCATATTACCTATCGCTCTCGCTCTGCTCCATCTGTGTTGGAGGTGAATGTTCATGAGCCCTCTGAACCAAGACCAGCACAACAGTCAGGGTGGATAGTTAGGCTATCTTTGATAGCAGTTATCGTGTATGTGGTAACTGGGGTTGCAGTGTACATGACAAGTGGGAGTTTCAAGGGCACTACCACAGCCAAGCTTGTAGATGCTATTTACTTTACAATGGTAACTCTTTGCACTACTGGCTATGGAGATATCATTCCTGACACGACGTTTACCAAAATCTTTACATGTATTTTCATTTTGGTGGGCTTTGGATTTGTTGCATATCTGCTCAATTGGTTGGTAGCATACATCTGTGATGCACAAGAAGCATTCTTGTTGAGCATTACCAATGAGAGTCCATACAAGAAGATTCTCACGACGTATATGGTTGATGAAAAGAAAGGAAGAATGAGGATAAGAACCAAATTTTGTGTGGCTTTGGCTGTTGTCATTGGCTGCATTGCTATCGGAACAATCACAGTGCACTTTGTTGAGGACCTTAATTGGGCTGACAGTTTTTACCTCTCCATTACTTCTGTCACAACGGTTGGTTATGGAGATTATTCTTTCAAAACTGTAACCGGAAGATCCTTTGCAATTTTATGGCTTTTGGTAAGCACACTGGCATTTGCCAAGGCCTTTGTATACCTCGCTGATTATAGCGTGCACAAGAGAACCCGTGAGATGGCGAAATGGGTTCTGAAGAAGAAGATAACGTTATCAGATTTCCCTGCTGCAGACCTTGATAATGATGGATCAATCAGTAAGTCAGAATTTGTCATATTCAAGCTTAAGGAAATGGGGAAGATTACTGAGATAGACATTCAGCGAATAAGCAGACACTTCGATTCCTTGGACTATGGCATGCATGGCAAGATTACTCTTGTTAACCTCATGGATAATGCAAACATCTCTTCTATAAGGGCAAACCAGTCTGTGAGACTACCATTATTGTAG 1173 0.4271 MQEPLLSPCSSRGLASPSGTSSPNEQSFHDLAPSPLQSPPYIINEARSPSNANLSLKKRHITYRSRSAPSVLEVNVHEPSEPRPAQQSGWIVRLSLIAVIVYVVTGVAVYMTSGSFKGTTTAKLVDAIYFTMVTLCTTGYGDIIPDTTFTKIFTCIFILVGFGFVAYLLNWLVAYICDAQEAFLLSITNESPYKKILTTYMVDEKKGRMRIRTKFCVALAVVIGCIAIGTITVHFVEDLNWADSFYLSITSVTTVGYGDYSFKTVTGRSFAILWLLVSTLAFAKAFVYLADYSVHKRTREMAKWVLKKKITLSDFPAADLDNDGSISKSEFVIFKLKEMGKITEIDIQRISRHFDSLDYGMHGKITLVNLMDNANISSIRANQSVRLPLL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1685 390 Gene3D - 85 190 - -
Apr9g1685 390 Gene3D - 194 313 - -
Apr9g1685 390 ProSitePatterns EF-hand calcium-binding domain. 319 331 IPR018247 -
Apr9g1685 390 Pfam Ion channel 98 175 IPR013099 -
Apr9g1685 390 Pfam Ion channel 221 291 IPR013099 -
Apr9g1685 390 PANTHER OS01G0696100 PROTEIN 43 370 - -
Apr9g1685 390 SUPERFAMILY Voltage-gated potassium channels 88 176 - -
Apr9g1685 390 MobiDBLite consensus disorder prediction 1 43 - -
Apr9g1685 390 SUPERFAMILY Voltage-gated potassium channels 193 308 - -
Apr9g1685 390 SUPERFAMILY EF-hand 307 370 IPR011992 -
Apr9g1685 390 MobiDBLite consensus disorder prediction 1 33 - -
Apr9g1685 390 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 43 370 IPR003280 GO:0005267|GO:0016020|GO:0071805
Apr9g1685 390 PRINTS Two pore domain K+ channel signature 133 161 IPR003280 GO:0005267|GO:0016020|GO:0071805
Apr9g1685 390 PRINTS Two pore domain K+ channel signature 253 262 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1685 Apr-Chr9 26096686 26098563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1685 16 375 Ion Channels AT4G18160 44.904 3.83e-104 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1685 K05389 - gmx:100789639 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1685 9 26096686 26098563 Apr9g1685 9 26096686 26098563 ECH