Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1683 ATGGCTAATGAGAAGGACCATTATTATGATCCCTTTTATTACAACCACCATGAACTCAACCACTCAAACTTTCCATTCTTTAGGGACAACAACTCAACACCAAGCTCACAACACTTTCAAGGGCTTGATAATCCCTCTCACTCCAGTTTCACTGATTACTTACATGGTTCCATGGATTACAACACCCTCTCAAAAGCCTTTGACTTGTCTTGCTCATCATCTGAAGTGATCTCCTCCATTGATGACAACCCAAAGAAACCCAGTACAGGAGACTCCGTAGGGATCAGCGGGAACCAATCAACACCCAATTCCTCAGTGTCTTCCTCATCTAATGAAGCCGAAGCAGTAATAGAAGAAGACTCAACCAAAAGCCACAAAGATAAGCAGCCAAAAGGGTGTGAAGAAGGAGATGAAAAGTCTAAGAAAGAGAACAAGCCCAAAAAGAAAGAGAAAAAGGCTAGAGAGCCTCGCTTTGCTTTCTTGACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCGTACCCAAGGAGCTACTACAGATGCACCAGTCAGAAGTGCAGTGTAAAGAAAAGGGTAGAGAGGTCATTCCAAGACCCATCAATTGTGATCACAACATATGAAGGACAACACAACCATCACTGTCCAGCCACACTCCGGGGTAATGCTGCCAGCATGTTGTCTTCACCTTCCCTTTTTGGTTCCACATATATGGGATCAACCTTACCCCAAGATGTCCTTGCTCAATTGCTTCCAAGTTATAGCCAAAATGATCACCAAAATCCCATGTTTCACCAAAACCTTTCCCATAATCCTCCTCATCCACAGCAGCAACAACAACAGCAGCAGTTCCAACTCCCTCGTGACTATGGATTGTTGCAAGACCTACTACCATCATTCCCAGGCAAACAAGAGCCATGA 960 0.4375 MANEKDHYYDPFYYNHHELNHSNFPFFRDNNSTPSSQHFQGLDNPSHSSFTDYLHGSMDYNTLSKAFDLSCSSSEVISSIDDNPKKPSTGDSVGISGNQSTPNSSVSSSSNEAEAVIEEDSTKSHKDKQPKGCEEGDEKSKKENKPKKKEKKAREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGNAASMLSSPSLFGSTYMGSTLPQDVLAQLLPSYSQNDHQNPMFHQNLSHNPPHPQQQQQQQQFQLPRDYGLLQDLLPSFPGKQEP* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1683 319 SMART WRKY_cls 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1683 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 313 IPR044810 GO:0003700
Apr9g1683 319 SUPERFAMILY WRKY DNA-binding domain 162 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1683 319 Gene3D WRKY domain 154 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1683 319 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 2 313 - -
Apr9g1683 319 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1683 319 MobiDBLite consensus disorder prediction 77 156 - -
Apr9g1683 319 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1683 319 MobiDBLite consensus disorder prediction 268 301 - -
Apr9g1683 319 MobiDBLite consensus disorder prediction 116 156 - -
Apr9g1683 319 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1683 Apr-Chr9 26083082 26085556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1683 44 319 WRKY Transcription Factor Family AT4G18170 48.276 3.98e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g1683 WRKY 8.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1683 - - aprc:113847247 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1683 9 26083082 26085556 Apr9g1683 9 26083082 26085556 ECH