Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1682 ATGTCAGCCAACAGTTCTTTGAATGTGGAATTGTCAAAGAAGACGTCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTTGGGGCATTTATAGTGTTGATTCTTTGTGCATTATCAATATGGGTGATGTTTCGGAGAAAATCTAGAAGATCTCTGGACAAGTACTCTCTATCCCAAATACCAAATGTCTCAAAAGATATCGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTGAACCAGAAAATGTGTTTATTCCTGTTGTTCATGATAAGGCAAGTGATAAGAGTTCAGAGAATGTATCAGTTCATTTGGGAAAGAGCAAATCCGGTGATCCTGATAGTATCAGTCAATGTAGCTCAATTTATCATCATGAGAGAGGGTTTAGTTCATTGTCAGCGGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACGTTGTCACATGGAGGGCTGGTGGCTGCATCTCCTTTAGTTGGATTGCCCGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACTCTTAGAGATCTGGAACTGGCAACCCATCGTTTCTCTACTGAGAACATTATTGGCGAGGGTGGGTATGGGATTGTTTACAGGGGCAGGCTGATCAACGGAACTGAGGTTGCAGTGAAGAAACTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTGGTGCGCTTGCTTGGGTATTGTGTAGAAGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGGGACATGCACCAACATGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACTGCAAAAGCGCTTGCTTATTTGCATGAAGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAAGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAACCACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCAGTAGACTATGCACGTCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTGGGGTCAAGGAGGGCAGAGGAAGTTGTGGACTCCAAGCTTGAAGTTAAACCACCAGCACGCGCTCTAAAGCGTGCCCTTCTGGTTGCACTTAGGTGTATTGATCCGGATGCAGACAAGAGGCCTAAAATGAGTCAAGTTGTTAGGATGCTCGAAGCTGATGAATATCCATTTCGAGAGGATAGAAGGAATAGAAAGAGTGGCACTGTCAACATGGAAATTGAAACAGCGAAGGATAATTCTGGTCCATCTGATGCTGAAAAGATTGGGCATTCTGAAAGCAACATGGGGGAAACAACTCAAGGATAG 1536 0.4284 MSANSSLNVELSKKTSFLGLKRWVLIGIGVGAFIVLILCALSIWVMFRRKSRRSLDKYSLSQIPNVSKDIDVDKVGVQSSHVEPENVFIPVVHDKASDKSSENVSVHLGKSKSGDPDSISQCSSIYHHERGFSSLSAEEGSSGNVKKQSTLSHGGLVAASPLVGLPEFSHLGWGHWFTLRDLELATHRFSTENIIGEGGYGIVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQHGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGSRRAEEVVDSKLEVKPPARALKRALLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSGTVNMEIETAKDNSGPSDAEKIGHSESNMGETTQG* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1682 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Apr9g1682 511 CDD STKc_IRAK 195 461 - -
Apr9g1682 511 SUPERFAMILY Protein kinase-like (PK-like) 173 462 IPR011009 -
Apr9g1682 511 Gene3D Transferase(Phosphotransferase) domain 1 265 477 - -
Apr9g1682 511 PANTHER RECEPTOR-LIKE KINASE PLANT 2 507 - -
Apr9g1682 511 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Apr9g1682 511 Pfam Protein kinase domain 190 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1682 511 ProSiteProfiles Protein kinase domain profile. 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1682 511 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Apr9g1682 511 PANTHER OS01G0323000 PROTEIN 2 507 - -
Apr9g1682 511 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1682 511 Coils Coil 209 229 - -
Apr9g1682 511 MobiDBLite consensus disorder prediction 468 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1682 Apr-Chr9 26071684 26076825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1682 19 463 Trihelix Transcription Factor Family AT1G70460 40.444 4.69e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr9g1682 Pkinase 8.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1682 - - gmx:100778444 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1682 9 26071684 26076825 Apr9g1682 9 26071684 26076825 ECH
Apr2g0082 2 1275557 1280131 Apr9g1682 9 26071684 26076825 PCT