Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1660 ATGCATAATTTTCTCGTTTCAAGGTTAGGTGCTTCCTTCGCATTCCCAATCTCACACCGATTCCAAATCCTTTTCTTCACCTCATTGCCTACCTTTTTCAAATCAAAGAAAAACCCACCCAAAGATGACAACTTTACGGTCTCTTACCTCGTCACCTCATGTGGGTTGTCGCCCGATACCGCCGCGCGTCTGTCCAGAAACCTCAGACTCAAAAATTCGTACAAACCAAATGCGGTCCTCAACCTTCTAAAAAACCACGGATTCTCCAAAACCCAGATTGCCACATACGTCCAGCAACATCCCAGGGTGCTTCTCAACAAGGCCCAGAAGACCCTTTTGCCTAAGCTCAAGTTCATCCACTCCATTGGGGTTCCAATCTCTGAAATCCCACGCGTCATTGCTCGTAACCATAAACTCTTAATAAGGAGCTTGTACAACTGGCTCGTCCCTCATTATAAGGTCCTTAGAAGTGTTCTTCGCAGTGATGAGGAAGTTGTTAGGGCTTTAAGGCACGGTGCACTTTCATTTCAATATGGTTACCTTACTGTGAAAAATTTGGCCTCTAACGTTAGTGTTTTGAGAGACTCTGGCGTGCCTCAAGCTTGCATCTCTTACTTGGTGATGTATCACCCAACTTCAGCATTTAGGAAACATTCAGAGTTTGTGGAAGGTGTTCAGTTAGCTAAGAAGATGGGGCTTGATCCTTTGAAAATATCTTATGTCAGTGCTATCCATGTGCTTATCCATGTGGATGGAGCACGGTGGGAAGCCAGATTAGCTGCTTATGCGAAGTGCGGTTGGTCTCATGAAATCTCTCTTATGGTGTTTAGAAAGTCTCCAGTTCTAATGTCGTTTACAGAGGAGAGGATTGTGAAATCAATGAATTTCCTTGTTAGGGATATGGGTTGGGCACTAGAAGATATTGCTAGATCCCCTCAGGTTCTAGCCTACAGCTTGGAGAAGAGAATTATACCCAGATGTACGGTAATTAATGTATTGAAATCAAAAGGTTTGCTCAAGAATCGTTTAAGTTTAGGTACCTTTTTGTGCATAAGGGAGGATATTTTTGTGAAGAAGTTTGTGACCAAATTTCTGGAGGATGTGCCTCTATTGCTGGATGTATATCAAGGTTCTATTGATCATCGAGATGTATTATAG 1158 0.4292 MHNFLVSRLGASFAFPISHRFQILFFTSLPTFFKSKKNPPKDDNFTVSYLVTSCGLSPDTAARLSRNLRLKNSYKPNAVLNLLKNHGFSKTQIATYVQQHPRVLLNKAQKTLLPKLKFIHSIGVPISEIPRVIARNHKLLIRSLYNWLVPHYKVLRSVLRSDEEVVRALRHGALSFQYGYLTVKNLASNVSVLRDSGVPQACISYLVMYHPTSAFRKHSEFVEGVQLAKKMGLDPLKISYVSAIHVLIHVDGARWEARLAAYAKCGWSHEISLMVFRKSPVLMSFTEERIVKSMNFLVRDMGWALEDIARSPQVLAYSLEKRIIPRCTVINVLKSKGLLKNRLSLGTFLCIREDIFVKKFVTKFLEDVPLLLDVYQGSIDHRDVL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1660 385 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 SMART mt_12 15 57 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 Pfam mTERF 80 234 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 Pfam mTERF 250 355 IPR003690 GO:0003690|GO:0006355
Apr9g1660 385 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 378 - -
Apr9g1660 385 Gene3D Transcription termination factor 3, mitochondrial 178 368 IPR038538 -
Apr9g1660 385 Gene3D Transcription termination factor 3, mitochondrial 53 177 IPR038538 -
Apr9g1660 385 PANTHER CGI-12 PROTEIN-RELATED 25 378 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1660 Apr-Chr9 25922572 25924890 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr9g1660 mTERF 2.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1660 K15032 - gmx:100777030 355.91