Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1631 ATGGCTGACAATGCTCCTCCACCATCTCTTTCCCCATCATCTGAGAAAGGATCCTCAAGCCAAAGCCCAAGGAGCTTTGCCACCCTTTCTAGTGGCTCCCCTATCATTGTCGGTGCTAATAGAAGTTACATGCCTATCACTCTTAACAACAACAAACCATTATCATTGTTATCACCATCACCACTATCACCCTCACCTGCACCTGGTGTATTTGGTGTCCTACCTCGTGAACCTGTCCAACAAGTGCAACCACAAGCCATGGTTGCACCTGTCAAAAGACGAAGAGGGAGGCCACCTGGCTCCAAAAATAAGTCTAAGGTGCCGATGATTATTTTCAAGGACACCGACCACCTTCTTAAACCAACTGTCATTGAAGTTCCAGATGGTACCGACGTGATAGATGCCATCATCAACTTTGCTCACAGCCACCATTTTAGTGTCTCAGTGCTTAGTGTTTCGGGTTCAATCTCCGAAGCCACCCTTCGTTACCCTTTCTCTCATGCCCCCACCATATCCGTTCGTGGAAAATCACCCATAGTGTCTCTCTCTGGCACTTACATAAACACCCTTTTACCTTCACAAGCCCCCATATTTACTCATTCCTCCTTCGCAATCCAAATAGCGGATAGCAACACCAACAAAATCTATGGTGGCCTTGTTGGAGGGAGGGTTATTGCTGCAGGTCCTGTTGTGGTCTTGCTTTCCAAGTTCAAGAAGCATGAGTATCATAGGTTGAACTCTAGTGCAAATGTTCATCTTTCAGCTCCTAAGAATGGTGATTTCATCACTAACAACAACGCTAACGCTAATGTGTCTACCTTTAGTGTTGCTACTCCTGTTGTTCCTGATTCCAAATTCATGCAGTGGAAAAAACATGATAGTAATTACTAA 891 0.4512 MADNAPPPSLSPSSEKGSSSQSPRSFATLSSGSPIIVGANRSYMPITLNNNKPLSLLSPSPLSPSPAPGVFGVLPREPVQQVQPQAMVAPVKRRRGRPPGSKNKSKVPMIIFKDTDHLLKPTVIEVPDGTDVIDAIINFAHSHHFSVSVLSVSGSISEATLRYPFSHAPTISVRGKSPIVSLSGTYINTLLPSQAPIFTHSSFAIQIADSNTNKIYGGLVGGRVIAAGPVVVLLSKFKKHEYHRLNSSANVHLSAPKNGDFITNNNANANVSTFSVATPVVPDSKFMQWKKHDSNY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1631 296 Gene3D - 120 255 - -
Apr9g1631 296 ProSiteProfiles PPC domain profile profile. 116 259 IPR005175 -
Apr9g1631 296 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 238 IPR005175 -
Apr9g1631 296 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 246 - -
Apr9g1631 296 MobiDBLite consensus disorder prediction 7 32 - -
Apr9g1631 296 CDD DUF296 120 237 IPR005175 -
Apr9g1631 296 MobiDBLite consensus disorder prediction 1 32 - -
Apr9g1631 296 MobiDBLite consensus disorder prediction 82 106 - -
Apr9g1631 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 271 IPR014476 GO:0003680
Apr9g1631 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 7 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1631 Apr-Chr9 25644389 25645279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1631 91 255 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.116 3.86e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1631 - - aprc:113874542 514.998