Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1625 ATGGCAGATAGTGTGGTAGAAATATTACTAAATGAACTTTCTCGGGTGGTGAAGGAAGAGGTAAATTTGCAGAAAGGAGTTAAAGATGAAATTAAGAAGGTTAAAGATGAACTTGCAACCATGAAAGCGTTTCTAAGATTTGTTGATGTCCAACAGGAGAAAGACTTAAGGCTTAAGCCATGGGTGGAGCAAGTGAGAGATGTTGCTTTTGAGATAGAAGATGTTGTCGATGACTACTTACTTCAAGTTGCTAGCGATGATGATGCAGGTAGTGCACATAACACTTGTTTCCGTAGCATTTGTTCCCCTTTCAAAAAGTGGAAAGCAAGGCACCAAATCGGTTCTGAGCTACAAAACATCAGAGGCAGAGTGAGTGAAATAGCAGAGCGTCCAAAAAGGTATGGCTATGATCCTTCACTCTTCAAGCAAGCTTCGAGTTCAAGCTCAGACGCAGGCCCTTCAGAGATGGATCAGTTTCGAAAGAATGTTGCAGCTTCGGTTGACGAAAGGCAATTGGTTGGCATAGATGCAGCAAAGGAGGAGGTGGTGAATTTGCTCAACGATGGTGACCTCAGTCTCAAAGTAGTCTCCATTGTTGGCATGGGAGGGTTGGGCAAAACAACCTTAGCCAAACAAATCTTCCGTGACATGTCGTCCCGTTTTGAACGCCGTGCGTTTGGCATTGTTTCCCAAACCCTGAAGGAAGATGAGTTTCTCAAAGATTTGATTGAGCAGCTGTTCTCCAAAGATGGAGAGATGTTGGAAATACAACAACTGTTACAACTGCCATTACATCGCCAGAAAGAAAAACTGAGGGAAATGCTTGAGGATGAAAGGTACTTGATTGTGGTTGATGACGTGTGGAAAACAAAACACTGGGATCAGATTAAAATGTCATTCCCCAGAAACAACAATGGGAGCAGAGTGATTGTTACAACTCGCATGGCACACGTGGCAAACCACTCTAGCGTGGAGTACGGTGGTCATGTCCATCGACTACAACCTTTGACTGACAATGATTCTTGGGATCTGTTCTGTAAGAGAACATTCCCAAAACAGCCTTGCCCTTCCCATTTGGAGCCCATTTGCAAAGACATTGTTTTCAACAAATGCAAGGGAGTTCCTATTGCTATATTGGCAATTGGTGGCCTTTTAAGTACCAAAAACTTGGGTGACGTTGACGAGTGGAAGAAGGTTCAAGAGAGTCTTGACATTGAGTTAGAGGAAAATCCTGAACTAGAAATGACCAAAAAGATACTCTCTTTGAGCTTTGATGATTTGCCTGATCACCTCAAACCTTGTTATATGTACTTGTGTATTTTCCCAGAAGATTCTCGCATAAAGTGGACGAGAGTGATTAGGTTGTGGATCGCAGAAGGTTTTGTGGCAAAGAGAGGTGGAAGAACGGTGGAGGAAGATGCTGACAGCTATTTGACTGAGCTTGTTAGCAGAAGTTTGATACAAATAGTTAAAGAAAGAAAGGATGGAAGCGGAAGGGTGAAGTGGTGTCGCATCCATGACTTTCTACGAGATATTATTCTCTCAAAGTCAAAAGAAGAGAGATTTGTTCACATGGCAGATACGGTGGAAGTTGGAGCAAGGCGATTATGTATTCATGCAAATGCAATAAAGAGAGGCATCGACATTAACTTACTATTGACATTGCCTCAACGACTTCGTTCTCTGTTAATGTTCTTTAATATCCCTGGTGATGAGGCTGAGGAAAATGCAAATGATACTTTCTTATCGCGTGATATTGGCTTCAAGTTTAATAAGCTGCTTAGTGTGTTAGATTTGGAAAGAGCTCCTTTAGATGCATTTCCTGAAGAAATTTGCACCTTGCTCCTCTTAAGGTATTTGTGTTTGAGAAATACTAAAATCTCAAAGCTTCCAAAGTCTATTGGGAATTTGCAAAGGCTAGAAATGTTGGACCTTAAGTACACCTTAATTGATGAGTTACCTCAAGAGATATCAATACTGCATAAAAAGCTTCGCCATCTTTTAATTTCTCGTTGCCATCAAAAGAGAACGGATTATAGGTTACGTAATTTTGAAAAGATAATAGTATATTTGAATGGTGAAAAAGGCACAGAAGATTATATTTCATCATATGATCATCAATCATGTGGTGTTAAGATAACATGCGACATTGGAAGGTTTGATTCATTACAAAAGGTGTGCTTTCTTGAAGCTCCAGAGAAGAGTGAGTGGATGAAGGATCTAGGGAAGTTGAGCCAGTTGAGAAAGTTGGGTTTGGTTAAATTGAGAGAGGAACAGTGGAAAGAAGTGTGTTCATGCATTTCTAGATTAACAAATCTGCGCTCTCTAATGCTTCAAACAGATTACTGGTTTGAGTTGGAAGATGTGTGTCCACCTCCACACCTTCAAAAATTACATTTGAATGGAAGTCTAAAGGAGTTACCGAGTTGGGTAAGTGGTTCATCTCTAAAGAACTTGCTTGTATTGAAGTTGATGAATACGAGACTGAAGAAGGACCCTGGCCCATCTCTCATGGGTTTGCCCAATTTGAGTAGGCTTGAGCTTTATAAGGCTTTCGATGATGGCATAAAGATGCGAGTGGTGCTCCCTGGTAATCCTTTCCCAAGCCTCATCACGTTGAGAGGATATTCTGATTATTATGTTGGTTACAGGGCATCCTCCAAACACTTTCCCTTGCCTGACATTGAGAACTTGTGGGAATGGGCTGCTAGTTTGACTGACTTCTATACAGCCATCGATAGCAGTATTCTAGTCGGTCTAGACAAACTCATCCCCCTAGCATCAGTTGATTAA 2793 0.4128 MADSVVEILLNELSRVVKEEVNLQKGVKDEIKKVKDELATMKAFLRFVDVQQEKDLRLKPWVEQVRDVAFEIEDVVDDYLLQVASDDDAGSAHNTCFRSICSPFKKWKARHQIGSELQNIRGRVSEIAERPKRYGYDPSLFKQASSSSSDAGPSEMDQFRKNVAASVDERQLVGIDAAKEEVVNLLNDGDLSLKVVSIVGMGGLGKTTLAKQIFRDMSSRFERRAFGIVSQTLKEDEFLKDLIEQLFSKDGEMLEIQQLLQLPLHRQKEKLREMLEDERYLIVVDDVWKTKHWDQIKMSFPRNNNGSRVIVTTRMAHVANHSSVEYGGHVHRLQPLTDNDSWDLFCKRTFPKQPCPSHLEPICKDIVFNKCKGVPIAILAIGGLLSTKNLGDVDEWKKVQESLDIELEENPELEMTKKILSLSFDDLPDHLKPCYMYLCIFPEDSRIKWTRVIRLWIAEGFVAKRGGRTVEEDADSYLTELVSRSLIQIVKERKDGSGRVKWCRIHDFLRDIILSKSKEERFVHMADTVEVGARRLCIHANAIKRGIDINLLLTLPQRLRSLLMFFNIPGDEAEENANDTFLSRDIGFKFNKLLSVLDLERAPLDAFPEEICTLLLLRYLCLRNTKISKLPKSIGNLQRLEMLDLKYTLIDELPQEISILHKKLRHLLISRCHQKRTDYRLRNFEKIIVYLNGEKGTEDYISSYDHQSCGVKITCDIGRFDSLQKVCFLEAPEKSEWMKDLGKLSQLRKLGLVKLREEQWKEVCSCISRLTNLRSLMLQTDYWFELEDVCPPPHLQKLHLNGSLKELPSWVSGSSLKNLLVLKLMNTRLKKDPGPSLMGLPNLSRLELYKAFDDGIKMRVVLPGNPFPSLITLRGYSDYYVGYRASSKHFPLPDIENLWEWAASLTDFYTAIDSSILVGLDKLIPLASVD* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1625 930 Gene3D - 158 326 IPR027417 -
Apr9g1625 930 Gene3D Ribonuclease Inhibitor 583 874 IPR032675 -
Apr9g1625 930 Gene3D - 5 114 - -
Apr9g1625 930 PRINTS Disease resistance protein signature 195 210 - -
Apr9g1625 930 PRINTS Disease resistance protein signature 274 288 - -
Apr9g1625 930 PRINTS Disease resistance protein signature 371 385 - -
Apr9g1625 930 PRINTS Disease resistance protein signature 635 651 - -
Apr9g1625 930 CDD RX-CC_like 2 129 IPR038005 -
Apr9g1625 930 Pfam Rx N-terminal domain 5 90 IPR041118 -
Apr9g1625 930 Gene3D - 335 423 IPR042197 -
Apr9g1625 930 Gene3D - 424 517 IPR036388 -
Apr9g1625 930 SUPERFAMILY RNI-like 556 851 - -
Apr9g1625 930 Pfam NB-ARC domain 178 426 IPR002182 GO:0043531
Apr9g1625 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 438 IPR027417 -
Apr9g1625 930 PANTHER DISEASE RESISTANCE PROTEIN RP 1 135 IPR044974 GO:0006952
Apr9g1625 930 PANTHER DISEASE RESISTANCE PROTEIN RP 163 874 IPR044974 GO:0006952
Apr9g1625 930 PANTHER OS08G0539900 PROTEIN 163 874 - -
Apr9g1625 930 PANTHER OS08G0539900 PROTEIN 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1625 Apr-Chr9 25569012 25573091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1625 163 336 WRKY Transcription Factor Family AT4G12020 28.977 3.03e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1625 K13457 - pop:18094100 574.318