Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1624 ATGGCAGATAGTGTGGTGGAACTATTGTTAAATAAACTTTTTTGGGTGATAAAGGAAGAGGTGAATTTACAGACAGGAGTCAAAGATGAAATTAGAAAGATCAAAGATGAACTTGCAGCCATGAAAACTTTCCTAAGATTTGCTGATGTCGAAAAAGAGGAAAATCCAATGCTTAAGTTATGGGTGGATCAAGTGAGAGACGTTACCTTTGAGATAGAAGATGTTGTCGACGATTACTTGATTCGAATTGCTTTTGATGATGATGCAGGTACTCGCAAATTGCTTCATTTGTTCCGCTTTCAGAAAGTGGAACCGAGGCACGATATCGGTTCTGAGCTACAAAGCATCAAAGACAGAGTGAATGAAATAGCAGAGCGTCCAAAAAGGTATGGCTATGATCTTTCTCTCTACAATAAAGGTTCGAGTTCAAGCTCAGACAGAGGCACTTCAGAGATGGATCAGTTTCGAAGGGATGTTCCAGCTTTGGTTGATGAAAGGCAATTGGTTGGCATAGACGCAGCAAAGAAGGAGGTGGAGAAATTTCTCAACGATGGTGACCCCAATCTCAAAGTTGTCTCCATTTTTGGCATGGGAGGGTTGGGTAAAACAACCTTAGCCAGACAAATCTGTCGTGACATGTCGTCCCATTTCGAACGACGTGCGTTTGGCATTGTTTCCCAAACCCTGATGGAAGATGGGTTTTTCAAAGATATAACTGAGCAGTTGTTCTCCAGAGACGGAGAAATGTTGGAAATGAAACAATTGTTGCAACTCCCATTGCATCAGTTGAAAGTAAGACTGAGGGAAAGGCTCGAGAATGAAAGGTACTTGATTGTGGTTGATGACGTGTGGAAAACCAAACACTGGGATCAGATTAAACTGTCATTCCCCAGAAACAACCATGGGAGCAGAGTCATTGTTACTACGCGCATGGAAAACGTGGCAAACCACTCTTGCGTGGAGTACGGTGGTCATGTCCATCGACTACAACCTTTGAATGAAAATGATTCTTGGGATCTGTTCTGTAAGAGAACATTCCCAACACAGCCTTGCCCTTCCCATTTGGAACCCATTTGCAAAGATATTGTTTTTAACAAGTGCAAGGGAGTTCCTATTGCTATATTGGCAATTGGTGGCCTTTTAAGTACCAAAAACGTGGGTGACGTTGGCGCTTGGAAGAACGTTCAAGAGAGTCTTGACATTGAGTTGAAGGAAAATCCTGAACTAGAAATGACCAAAAAGATACTCTCTTTGAGCTTTGATGATTTGCCTTATCACCTCAAACCTTGTTATATGTACTTGTGTATTTTCCCAGAAGACTCTCTCATAAAGTGGACGAGAGTGATTAGGTTGTGGATCGCAGAAGGTTTTGTGACAAAGAGAGGTGGGAGAAGGGCCGAGGAGCATGCTGACAACGATTTGTGTGAGCTTGTTAGCAGAAGTTTGATACAAATAGTTGAAGAAAGAGAGGATGGAAGTAGAAGGGTGAAGTGGTGTCGCATCCATGACTTTCTACGAGAGTCAAAAGAAGAGAGATTTGTTCACATGGCAGATACGGTGGAAGTTGGAGCAAGGCGATTATGTATTCATGCAAATGCAATAAAGAGAGGCATCGACATTAACTTACTATTGACATTGCCTCAACGACTTCGTTCTCTGCTAATGTTCTTTAATATCCCTCAAGACGAGGCAAAGGCAAAAGTAAATGGAGCTTTGTTTTTGCGAGATATTGGCTTCAAGTTTAATAAGCTACTTAGTGTGTTAGATTTGGAAAGAGCTCCCTTAGATGCATTTCCTGAAGGAATTTGCACGTTGCTCCTCTTAAGGTATTTGTGTTTGAAAAATACTAAAATCTCAAAGCTTCCAAAGTCCATTGGGAATTTGCAAAGGCTAGAAACGTTGGACCTAAGGTACACCTTGATTAATGAGCTACCTAAAGAGATATCAATGCTGCATAAAAAGCTTTGCCATCTTTTGATTTCTCGTTGCCATCAAGTGGGAAAAGCTAGTAAGATACGTCAGGTTGACAAGGAAATAGTATATTTGAATGGTAAGAAAAATGTGAAATATTATATTTCCTATAATGATCAATCATGTGGTGTTAAGATAACATGCGACATTGGAAGGTTTGAATCATTACAAAAGGTGAGCTTCCTTGAAGCACCAAAAATGAGCGGGTGGATAAAGGATCTGGGGAGGTTGACCCAATTGAGAAAGTTAGGTTTGGTTAAATTGAGAAAGGAACAGCGGAGAGAAGTGTGTGTATGCATTTCCATATTGATAAATCTGCGTTCTCTAATACTTCAAACAGATTACTTGTTTGAGTTGGAAGATGTGTCCTCACCTCCAAATCTTCAAAAATTACTTTTGAATGGTAGTCTAAAGGAGTTACCAAGTTGGGTGCGTGCTTCATCTCTACAAAACTTGCTTGTATTGAAGTTGATGAATACGAGACTGAAGAAGGACCCTGGCCCGTCTCTCATGGGCTTGCCCAAATTGAGTAGGCTTGAGCTTTACAAGGCTTTCGATTATGGCACAAAGATGAGGGTAGTGCTGCCTGGTAATACTTTCCCAAGCCTTACCACATTGAGAGGATACGATGATAATGCCTCTTACGAGTTTGACTTAGAGGAGAGGAGTAAAGAAGAACGATGGGAAGAGATTGCCCTCGTGTTGAATTCTCTAGCTGTTCCCCAGTTTGACGATGTTTCAATTGGCTTAGATGAACTCATCCCCTTAGCTTCAGCTCATTAA 2754 0.4114 MADSVVELLLNKLFWVIKEEVNLQTGVKDEIRKIKDELAAMKTFLRFADVEKEENPMLKLWVDQVRDVTFEIEDVVDDYLIRIAFDDDAGTRKLLHLFRFQKVEPRHDIGSELQSIKDRVNEIAERPKRYGYDLSLYNKGSSSSSDRGTSEMDQFRRDVPALVDERQLVGIDAAKKEVEKFLNDGDPNLKVVSIFGMGGLGKTTLARQICRDMSSHFERRAFGIVSQTLMEDGFFKDITEQLFSRDGEMLEMKQLLQLPLHQLKVRLRERLENERYLIVVDDVWKTKHWDQIKLSFPRNNHGSRVIVTTRMENVANHSCVEYGGHVHRLQPLNENDSWDLFCKRTFPTQPCPSHLEPICKDIVFNKCKGVPIAILAIGGLLSTKNVGDVGAWKNVQESLDIELKENPELEMTKKILSLSFDDLPYHLKPCYMYLCIFPEDSLIKWTRVIRLWIAEGFVTKRGGRRAEEHADNDLCELVSRSLIQIVEEREDGSRRVKWCRIHDFLRESKEERFVHMADTVEVGARRLCIHANAIKRGIDINLLLTLPQRLRSLLMFFNIPQDEAKAKVNGALFLRDIGFKFNKLLSVLDLERAPLDAFPEGICTLLLLRYLCLKNTKISKLPKSIGNLQRLETLDLRYTLINELPKEISMLHKKLCHLLISRCHQVGKASKIRQVDKEIVYLNGKKNVKYYISYNDQSCGVKITCDIGRFESLQKVSFLEAPKMSGWIKDLGRLTQLRKLGLVKLRKEQRREVCVCISILINLRSLILQTDYLFELEDVSSPPNLQKLLLNGSLKELPSWVRASSLQNLLVLKLMNTRLKKDPGPSLMGLPKLSRLELYKAFDYGTKMRVVLPGNTFPSLTTLRGYDDNASYEFDLEERSKEERWEEIALVLNSLAVPQFDDVSIGLDELIPLASAH* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1624 917 Gene3D - 420 511 IPR036388 -
Apr9g1624 917 PANTHER OS08G0539900 PROTEIN 1 132 - -
Apr9g1624 917 PANTHER OS08G0539900 PROTEIN 159 865 - -
Apr9g1624 917 Gene3D - 5 110 - -
Apr9g1624 917 PANTHER DISEASE RESISTANCE PROTEIN RP 1 132 IPR044974 GO:0006952
Apr9g1624 917 PANTHER DISEASE RESISTANCE PROTEIN RP 159 865 IPR044974 GO:0006952
Apr9g1624 917 Pfam Rx N-terminal domain 5 84 IPR041118 -
Apr9g1624 917 Gene3D - 149 321 IPR027417 -
Apr9g1624 917 Gene3D Ribonuclease Inhibitor 576 875 IPR032675 -
Apr9g1624 917 Gene3D - 331 419 IPR042197 -
Apr9g1624 917 Pfam NB-ARC domain 174 422 IPR002182 GO:0043531
Apr9g1624 917 CDD RX-CC_like 2 125 IPR038005 -
Apr9g1624 917 SUPERFAMILY L domain-like 574 863 - -
Apr9g1624 917 PRINTS Disease resistance protein signature 191 206 - -
Apr9g1624 917 PRINTS Disease resistance protein signature 270 284 - -
Apr9g1624 917 PRINTS Disease resistance protein signature 367 381 - -
Apr9g1624 917 PRINTS Disease resistance protein signature 626 642 - -
Apr9g1624 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1624 Apr-Chr9 25560771 25564653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1624 169 341 WRKY Transcription Factor Family AT5G45050 28.736 5.21e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1624 K13457 - pop:18094100 528.865