Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g1619 | ATGGAGGATGTGAGAGGCACCTATTCATTGGGGAAAGAGCTAGGGAGAGGACAATTTGGTGTCACACATTTGTGCACACACAAGACCACAGGGCGGCAATATGCATGCAAAACAATAGCTAAGAGAAAGCTTGTGAACAAGGAGGATATAGAAGATGTTAAAAGGGAGGTTCAAATCATGCACCATCTCTCGGGGCAGCCTAATATTGTGGAACTTGTTGGCGTGTATGAGGATAAGCAATCTGTTCATTTGGTGATGGAGTTGTGTGCTGGGGGTGAACTCTTCGATCGTATCATTGCCAAGGGACATTACACTGAGCGTGCTGCGGCTTCCTTGTTGAGAACCATTGTTCAGATTGTGCATACTTTCCATTCCATGGGTGTCATTCATAGAGATCTTAAGCCTGAGAATTTCCTCTTGTTGAACAAGGATGAGAATGCACCCCTCAAGGCCACCGATTTTGGCCTTTCAGTTTTTTACAAGCAAGGAGAGGTGTTCAAAGACCTTGTTGGTAGTGCTTATTACATTGCACCTGAGGTCTTGAAGAGGAGATATGGGCCAGAAGTAGACATTTGGAGTATCGGGGTCATGTTATACATTCTTCTATCCGGTGTTCCTCCATTTTGGGCAGAATCCGAAAATGGGATATTCAAAGCCATTCTACGAGGCCATGTTGACTTCACAAGCGATCCGTGGCCATCCATTTCACCTGCAGCTAAAGATCTTGTAAGGAAAATGTTGAATTCGGATCCCAAGCAGAGGCTGACGGCCTACCAAGTTCTGAATCATCCATGGATCAAGGAGGATGGAGAAGCACCGGATACACCTCTTGACAATGCAGTGCTGAATAAGCTCAAACAATTCAGAGCAATGAACCAATTCAAGAAAGTTGCTCTAAGGGTCATTGCCGGGTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTTAGGGGAATGGACACTGACAACAGTGGAACCATAACAATTGAAGAGCTAAAGCAAGGACTCGCAAAACAAGGGACTAAGCTGACAGAACAGGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGAACCATAGATTACGATGAATTCATCACAGCAACAATGCACATGAACCGAGTAAACAGAGAAGAACATCTCTACACTGCCTTCCAATACTTTGACAAAGATAACAGCGGGTACATTACCATTGAAGAACTGGAGCAAGCTCTCAAAGAGTTTAACATGCACGACGGCAGGGACATCAACGAAATCCTTTCAGAAGTTGATGCAGATAATGATGGCCGGATTAACTACGATGAGTTCGCTGCAATGATGAGCAAAGGAAATATAATCGGCCAAACTATCAAAATGCAACAAGAAAATAGTATGTGA | 1392 | 0.4404 | MEDVRGTYSLGKELGRGQFGVTHLCTHKTTGRQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQPNIVELVGVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTFHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEVFKDLVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLSGVPPFWAESENGIFKAILRGHVDFTSDPWPSISPAAKDLVRKMLNSDPKQRLTAYQVLNHPWIKEDGEAPDTPLDNAVLNKLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKQMFRGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRVNREEHLYTAFQYFDKDNSGYITIEELEQALKEFNMHDGRDINEILSEVDADNDGRINYDEFAAMMSKGNIIGQTIKMQQENSM* | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g1619 | 463 | Gene3D | - | 274 | 449 | - | - | |
Apr9g1619 | 463 | ProSitePatterns | EF-hand calcium-binding domain. | 322 | 334 | IPR018247 | - | |
Apr9g1619 | 463 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 273 | - | - | |
Apr9g1619 | 463 | Pfam | EF-hand domain pair | 383 | 446 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | Pfam | EF-hand domain pair | 314 | 374 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 420 | 451 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | SMART | efh_1 | 385 | 413 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | SMART | efh_1 | 313 | 341 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | SMART | efh_1 | 420 | 448 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | SMART | efh_1 | 349 | 377 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | ProSitePatterns | EF-hand calcium-binding domain. | 358 | 370 | IPR018247 | - | |
Apr9g1619 | 463 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 1 | 454 | - | - | |
Apr9g1619 | 463 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 | |
Apr9g1619 | 463 | PANTHER | CALMODULIN-DOMAIN KINASE CDPK PROTEIN | 1 | 454 | - | - | |
Apr9g1619 | 463 | ProSiteProfiles | Protein kinase domain profile. | 8 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr9g1619 | 463 | SMART | serkin_6 | 8 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr9g1619 | 463 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 93 | - | - | |
Apr9g1619 | 463 | CDD | STKc_CAMK | 8 | 265 | - | - | |
Apr9g1619 | 463 | Pfam | Protein kinase domain | 8 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr9g1619 | 463 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 267 | IPR011009 | - | |
Apr9g1619 | 463 | ProSitePatterns | EF-hand calcium-binding domain. | 429 | 441 | IPR018247 | - | |
Apr9g1619 | 463 | ProSitePatterns | EF-hand calcium-binding domain. | 394 | 406 | IPR018247 | - | |
Apr9g1619 | 463 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 309 | 344 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 381 | 416 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 345 | 380 | IPR002048 | GO:0005509 | |
Apr9g1619 | 463 | SUPERFAMILY | EF-hand | 306 | 447 | IPR011992 | - | |
Apr9g1619 | 463 | ProSitePatterns | Protein kinases ATP-binding region signature. | 14 | 41 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g1619 | Apr-Chr9 | 25537297 | 25547676 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g1619 | 1 | 449 | EF-hand Containing Proteins | AT5G12180 | 87.528 | 0.0 | 843 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Apr9g1619 | Pkinase | 2.6e-75 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g1619 | K13412 | - | gmx:100820422 | 865.914 |