Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1617 ATGACAGACAGTGTAGTAGAAATATTACTAAATGAACTTTCTCGAATAATAAAAGAAGAGGTGAATTTGCAGAAAGGAGTTAAAGATGAAATTAAGAAACTTTCAGATGAACTTGCAACCATGAAAATTTTCTTAAGATTTGCAGAGGTCCAAAAAGAGAACGACCCAATGCTAAAGATATGGGTAGAGCAAGTGAGAAATGTTGCTTTTGAGATAGAAGATGTTGTGGATGACTACGTGCTTCGGATTGCTTCTGAAGATGATGAAGCAGGTGGTGCATGTACCACATGTTTCGGAAGCATTTGTTCTGCTTTCAGAAAGTGGAAAGCGAGGCACGAAATCGGTTCTGAGCTACAAAGGATCAGAGGCAGAGTGAATGAAACAGCAGATCGTCCAAAAAGGTATGGCTATGATCCTTCACTCTACAAGAATGGTTCGAGTTCAAGCACTTCGGAGGTGGATCAGTTTCGAAGGGATGTTCCAGCTTTGGTTGATGAAAGGCAATTGGTTGGCATTGACGCAGCAAAGGAGGAGGTGGAGAAATTTCTCAACGATGGTGACCCAAATCTCAGAGTTGTCTCCATTTTTGGCATGGGAGGGTTGGGTAAAACAACCTTAGCCAGACAAATCTGTCGTGACATGTCGTCCCATTTCGAACGATGTGTGTTTGGCATTGTTTCCCAAACCCTGATGGAAGATGAGTTTTTCAAAGATATAACTGAGCAGTTGTTCTCCAGAGATGGAGAAATGTTGGAAATGAAACAATTGTTGCAACTCCCATTGCATCAGTTGAAAGTAAGACTGAGGGAAAGGCTCGAGAATGAAAGGTACTTGATTGTGGTTGATGACGTGTGGAAAACCAAACACTGGGATCAGATTAAACTGTCATTCCCCAGAAACAACCATGGGAGCAGAGTCATTGTTACTACCCGCATGGAAAACGTGGCAAACCACTCTTGCGCGGAGTACGGTGGTTATGTCTATTGGCTACAACCTTTGACTGACCATGATTCTTGGGATCTGTTCTGTAAGAGAACATTCCCAACACAACATTGCCCTTCCCATTTGGAACCCATTTGCAAAGACATTGTTTCTAACAAGTGCAAGGGAGTTCCTATTGCTATATTGGCAATTAGTGGCCTTTTAAGTACCAAAAAGGTGGGTGACGTTGACGCTTGGAAGAACGTCCAAGAGAGTCTTGACATTGAGTTGAAGGAAAATCCTGAACTAGAAATGACCAAAAAGATACTCTCTTTGAGCTTTGATGATTTGCCTTATCACCTCAAACCCTGTTTTATGTACCTGTGTATTTTCCCAGAAGACTCTTCCATAAAGTGGACGAAAGTGATTCGGTTGTGGATAGCAGAAGGTTTTGTGGCAAAGAGAGGTAGAAGAACGGTGGAGGAAGATGCTGCCAGCTATTTGTGTGAGCTTGTTAACAGAAGTTTGATACAAATAGTTATAGAAAGAGAGGATGGAAGTGGAAGAGTAAACTTGTTTCGCATCCATGACTTTCTACGAGAAATTGTTCTCTCAAAGTCAAAAGAAGAGAGATTTGTTCACATGGCAGATGCGATGGAAGTTGGAGCAAGGCGATTATGTATCCATGCAAATGCGATAAAGAGAGGTACTGACATCAACTTACTTTTGGCATTGCCTCAGCGACTTCGTTCTCTGTTAATGTTCTTTAATATCCCTGGTGATGAGGCTGAGAAAAATGCAAATGATACTTTCTTATTGCGTGATATTGGCTTTAAGTTTAATAAGCTGCTTAGTGTGTTAGATTTGGAAAGAGCTCCCTTAGATGCATTTCCTGAAGAAATTTGCACCTTGCTCCTCCTACGGTATTTGTGTTTGAGAAATACTAAACTCTCAAAGCTTCCAAAGTCTATTGGGAATCTGCAAAGGCTAGAAACGTTGGACCTGAGGTACACCTTAATTGTTGAATTACCTGAGGAGATATCAATGCTTCATAAAAAGCTTCGCCATCTTTTGATTTCTCGTTGCCATCAAACCGACAAAATTCATAGGAGATGGGGGGAGGTTGAGAAGGAAATAGTATATTTGTACAGGGAAGAAAATGGGGGAGATTATATTTCATCATATGATAAAAAATCATGTGGTGTGAAGGTAACATGCGAAATTGGAAAGTTTGATTCATTACAAAATGTGTGCTTCCTTGAGGTACCAGAAAAGAGGGAGTGGATGAAGGATCTGGGGAGGTTGACCCAATTGAGAAAGTTGGGTTTAGTTAAATTGAGAGAGGAACAGTGGAGCGAAGTGTGTTCATGCATTTCTAGATTAATAAATTTGCGCTCTCTAATGCTTCAAACAGATTACGAGTTTGAGTTGGAAGATGTGTGTCCACCTCCACACCTTCAAAACTTACATTTGAACGGAAATCTATTCGAGTTACCAAGTTGGGTGTGTGCTGCTTCTCTACAAAACTTGCTTGTATTAAAGTTGATGAATACGATACTATTAAAGGATCCTGGGCCGGCTCTCATGGGCTTGCCCAATTTGAGGAGGCTCGAGCTTTACGAGGCTTTTGGTTATGGCATCAAGATGCGGGTAGTGCTGCCTGGTAATCCTTTTCCAAGCCTTACCACATTGAGACGATATCAGGATAACGTATCTCAAACGATAACCTTTGGGGCGCGGGAAAAAGAAGAAACATGGGAATGGGTTGCCGAGTGGCCAAGTGCTGAACAACAACATTACTCTGGTGTTTCAATTGGCCTAGATAGACGCATTCTCCTCAAGCCCAACTAA 2772 0.4156 MTDSVVEILLNELSRIIKEEVNLQKGVKDEIKKLSDELATMKIFLRFAEVQKENDPMLKIWVEQVRNVAFEIEDVVDDYVLRIASEDDEAGGACTTCFGSICSAFRKWKARHEIGSELQRIRGRVNETADRPKRYGYDPSLYKNGSSSSTSEVDQFRRDVPALVDERQLVGIDAAKEEVEKFLNDGDPNLRVVSIFGMGGLGKTTLARQICRDMSSHFERCVFGIVSQTLMEDEFFKDITEQLFSRDGEMLEMKQLLQLPLHQLKVRLRERLENERYLIVVDDVWKTKHWDQIKLSFPRNNHGSRVIVTTRMENVANHSCAEYGGYVYWLQPLTDHDSWDLFCKRTFPTQHCPSHLEPICKDIVSNKCKGVPIAILAISGLLSTKKVGDVDAWKNVQESLDIELKENPELEMTKKILSLSFDDLPYHLKPCFMYLCIFPEDSSIKWTKVIRLWIAEGFVAKRGRRTVEEDAASYLCELVNRSLIQIVIEREDGSGRVNLFRIHDFLREIVLSKSKEERFVHMADAMEVGARRLCIHANAIKRGTDINLLLALPQRLRSLLMFFNIPGDEAEKNANDTFLLRDIGFKFNKLLSVLDLERAPLDAFPEEICTLLLLRYLCLRNTKLSKLPKSIGNLQRLETLDLRYTLIVELPEEISMLHKKLRHLLISRCHQTDKIHRRWGEVEKEIVYLYREENGGDYISSYDKKSCGVKVTCEIGKFDSLQNVCFLEVPEKREWMKDLGRLTQLRKLGLVKLREEQWSEVCSCISRLINLRSLMLQTDYEFELEDVCPPPHLQNLHLNGNLFELPSWVCAASLQNLLVLKLMNTILLKDPGPALMGLPNLRRLELYEAFGYGIKMRVVLPGNPFPSLTTLRRYQDNVSQTITFGAREKEETWEWVAEWPSAEQQHYSGVSIGLDRRILLKPN* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1617 923 Gene3D - 148 322 IPR027417 -
Apr9g1617 923 PANTHER DISEASE RESISTANCE PROTEIN RP 1 136 IPR044974 GO:0006952
Apr9g1617 923 PANTHER DISEASE RESISTANCE PROTEIN RP 161 873 IPR044974 GO:0006952
Apr9g1617 923 Pfam NB-ARC domain 174 423 IPR002182 GO:0043531
Apr9g1617 923 Gene3D Ribonuclease Inhibitor 564 690 IPR032675 -
Apr9g1617 923 PANTHER OS08G0539900 PROTEIN 161 873 - -
Apr9g1617 923 PANTHER OS08G0539900 PROTEIN 1 136 - -
Apr9g1617 923 PRINTS Disease resistance protein signature 192 207 - -
Apr9g1617 923 PRINTS Disease resistance protein signature 271 285 - -
Apr9g1617 923 PRINTS Disease resistance protein signature 368 382 - -
Apr9g1617 923 PRINTS Disease resistance protein signature 632 648 - -
Apr9g1617 923 Gene3D - 421 514 IPR036388 -
Apr9g1617 923 CDD RX-CC_like 3 130 IPR038005 -
Apr9g1617 923 Gene3D Ribonuclease Inhibitor 698 885 IPR032675 -
Apr9g1617 923 Pfam Rx N-terminal domain 5 89 IPR041118 -
Apr9g1617 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 435 IPR027417 -
Apr9g1617 923 SUPERFAMILY L domain-like 502 872 - -
Apr9g1617 923 Gene3D - 5 115 - -
Apr9g1617 923 Gene3D - 332 420 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1617 Apr-Chr9 25530894 25535254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1617 148 315 WRKY Transcription Factor Family AT4G12020 26.111 2.88e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1617 K13457 - csin:114264308 542.347