Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1608 ATGGCTTCTAGAGCTATTGCTCCTCAGGAACAACCCATAGGTGAGAATAAGCAAAAGAATGTGGGTGGAGAAGGAAGAACTAGAAGGGTGCTCCAGGATATTGGTAATCTTGTGGCTAAACAGGCAGAACCCGGTGCTAATGTAACTAAGAGAGTCACAAGGAACTTTAGTGCTCAATTATTGGCTAATGCACAGGCAGCAGCAGAGAAGAACAAGAATTCAAACGCTGAACTAGGGAATGGCGGAGTGGTAGCAGCTAATGGGGTTGGTGTTGGGAATTTTGTTGCTGCAACAAAGGTAGAACCAGGTCAGAAGCCTACACAGGAACCTGAAGTAATTGTCATTAGCTCTGATGAAGAATCTGAAGAGAAGGAGAAGCAAGCTGTTGATGTAAGAAAGACAAGGAAAGAAAGATCTGCTGGGAAAAATGCTAAAGCCTTTAGTTCAGTCCTCAGTGCTAGAAGCAAGGCTGCTTGTGGAATCGTTTATAGCTCGAAGGAATTGGTAGAGAACATTGATGCAAGTGACAAGGACAATGAATTGGCAGCAATAGAGTACATTGATGATATGTACAACTTTTACAAACTCACTGAAAATGATGGTCGTGTACACGATTACATGGGTTCACAACCAGATATAAATGCCAAGATGAGATCTATTCTTGTGGACTGGTTGATAGAAGTGCATCGCAAATTTGAACTCATGCCAGAAACTCTCTATCTGACCCTCAACATTGTTGACCGGTTCCTGTCCATGAAGGCTGTGCCTAGAAGGGAACTTCAGCTGGTTGGCATCAGTTCCATGCTGATAGCCTCAAAATATGAAGAAATTTGGGCACCAGAGGTTAATGACTTTGTATGCATATCAGATAATGCTTATAATAGAGAACAGGTACTGATGATGGAGAAAACCATCCTGAGACAACTTGAATGGTATCTAACTGTTCCCACACCATATGTTTTCCTGGTTCGGTATATCAAAGCCTCCACTCCATCTGATAATGCGATGGAAAACATGGTGTTTTTCCTTGCTGAACTTGGTCTAATGCACTATCCTACTGTAACGTTGTACCCTCCTTCTCTGATTGCTGCTTCTGCTGTGTATGCGGCTAGATGTACCCTTGAAAGAAGCCCTGTCTGGTCTGAGACTTTGAAGCACTACACAGGCTACTCTGAGGAACAACTAAGGGATTGTGCCAAACTAATGGTCAACCTTCATTCTGGTGCTCCAGAAAGTAAGCTGAGGGCAGTTTACAAGAAGTTCTGTAGCTCAGATCGGTGTACTGTTGCTCTACTTACACCAGCAAAGAACTTGTTATCACAGTCTTGA 1329 0.4312 MASRAIAPQEQPIGENKQKNVGGEGRTRRVLQDIGNLVAKQAEPGANVTKRVTRNFSAQLLANAQAAAEKNKNSNAELGNGGVVAANGVGVGNFVAATKVEPGQKPTQEPEVIVISSDEESEEKEKQAVDVRKTRKERSAGKNAKAFSSVLSARSKAACGIVYSSKELVENIDASDKDNELAAIEYIDDMYNFYKLTENDGRVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSMKAVPRRELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYNREQVLMMEKTILRQLEWYLTVPTPYVFLVRYIKASTPSDNAMENMVFFLAELGLMHYPTVTLYPPSLIAASAVYAARCTLERSPVWSETLKHYTGYSEEQLRDCAKLMVNLHSGAPESKLRAVYKKFCSSDRCTVALLTPAKNLLSQS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1608 442 PANTHER CYCLIN-B1-4 21 437 - -
Apr9g1608 442 SUPERFAMILY Cyclin-like 317 437 IPR036915 -
Apr9g1608 442 SUPERFAMILY Cyclin-like 178 313 IPR036915 -
Apr9g1608 442 MobiDBLite consensus disorder prediction 1 28 - -
Apr9g1608 442 Pfam Cyclin, N-terminal domain 190 313 IPR006671 -
Apr9g1608 442 PANTHER CYCLINS 21 437 IPR039361 -
Apr9g1608 442 Gene3D - 203 314 - -
Apr9g1608 442 CDD CYCLIN 314 403 IPR013763 -
Apr9g1608 442 PIRSF Cyclin_A_B_D_E 2 442 IPR039361 -
Apr9g1608 442 Pfam Cyclin, C-terminal domain 316 433 IPR004367 -
Apr9g1608 442 CDD CYCLIN 217 306 IPR013763 -
Apr9g1608 442 SMART Cyclin_C_2 316 435 IPR004367 -
Apr9g1608 442 SMART cyclin_7 320 404 IPR013763 -
Apr9g1608 442 SMART cyclin_7 223 307 IPR013763 -
Apr9g1608 442 ProSitePatterns Cyclins signature. 218 249 IPR006671 -
Apr9g1608 442 Gene3D - 189 430 - -
Apr9g1608 442 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1608 Apr-Chr9 25420562 25423062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1608 1 432 Core Cell Cycle Gene Families AT2G26760 50.917 1.83e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1608 K21777 - gmx:547782 614.379