Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1599 ATGGCTATCACCTTCTCAAATCTACACACCGAAGAGGGCCTCAAATCCCTCGATCAATTCCTCTCTGGGAAGACTTATATTTCTGGGGATCAATTGACAAAGGATGATATCAAAGTGTATGCATTTGTTGTGGGAAAGCCAGGTGACTCTTTTCTCAATGCTGCCAAGTGGTACGATGTTGTCTCTTCCCATCTTGCTAAAAGCTTCCCGGGGAATGCTCAAGGGGTAAAATTCAGTGGCAAAGCTGCTCCAGCTGAAGCTGCACCTGCCAAAGCGGTTGCTTCAGCTGAAGCTGAAGATGACGATGATCTTGATCTCTTTGGTGATGAGACCGAGGAGGATAAGAAGGCAGCGGAGGAAAGGGAGGCTGCTAAGAAGTCCACCAAGAAGAAAGAAAGTGGCAAATCTTCGGTTCTGCTTGATGTTAAGCCTTGGGACGATGAGACTGACATGAAGAAGCTGGAAGAGGCTGTTCGTAGCGTTGAGATGCCCGGCTTATTGTGGGGAGCATCAAAACTGGCTCCAGTGGGATACGGGATCAAGAAGTTGCAGATCATGATGACCATTGTTGATGACCTTGTATCTGTGGACTCTCTCATTGAGGAACATCTCACAGTTGAGCCATGCAATGAGTATATCCAAAGCTGTGACATTGTTGCATTCAACAAAATTTAA 675 0.4637 MAITFSNLHTEEGLKSLDQFLSGKTYISGDQLTKDDIKVYAFVVGKPGDSFLNAAKWYDVVSSHLAKSFPGNAQGVKFSGKAAPAEAAPAKAVASAEAEDDDDLDLFGDETEEDKKAAEEREAAKKSTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEMPGLLWGASKLAPVGYGIKKLQIMMTIVDDLVSVDSLIEEHLTVEPCNEYIQSCDIVAFNKI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1599 224 Pfam EF-1 guanine nucleotide exchange domain 137 224 IPR014038 GO:0003746|GO:0006414
Apr9g1599 224 SMART EF1_GNE_2 135 224 IPR014038 GO:0003746|GO:0006414
Apr9g1599 224 SUPERFAMILY GST C-terminal domain-like 9 65 IPR036282 -
Apr9g1599 224 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 213 224 IPR001326 GO:0003746|GO:0005853|GO:0006414
Apr9g1599 224 Gene3D - 128 224 IPR014717 -
Apr9g1599 224 PANTHER ELONGATION FACTOR 1-BETA 2 1 224 - -
Apr9g1599 224 CDD EF1B 133 224 IPR014038 GO:0003746|GO:0006414
Apr9g1599 224 SUPERFAMILY eEF-1beta-like 132 224 IPR036219 -
Apr9g1599 224 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 100 108 IPR001326 GO:0003746|GO:0005853|GO:0006414
Apr9g1599 224 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1599 Apr-Chr9 25359772 25362287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1599 1 224 Eukaryotic Initiation Factors Gene Family AT5G12110 74.561 1.51e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1599 K03232 - gmx:100500082 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0024 2 377510 380829 Apr9g1599 9 25359772 25362287 PCT