Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1591 ATGGGGAACTCCTGCAGAAAACCAGTTGCTCACGTGTCTTCCACAAGTTTTTTTGGAAGTACAAAGTCTCAAAGCAACACAAAGCAGAAATCAAATTCTCCTGAACGAAAAGCTCATTTGGAAACTTCAGCATCAAATGTTGACAAACCCATCTCCAATAACCTTAAGTCCTTCACCTTCTATGATCTAAAGGAGGCCACTAAGAACTTCAGGTATGAAAATTTAGTTGGAGAAGGAGGGTTTGGTTTTGTCTACAAAGGATGGATAGATGAGAACACCTATGCTCCCACAAGACCAGGAACTGGAATTGTAGTAGCCATTAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTGGCGGAAGTCAATTATCTAGGCCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTACTGTTCAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAACCTGTTCCCTGGATTACACGGATCAATATTGCTGTTTCTGTTGCAAGAGGATTAACATTTCTACATTCTCTTGATGCCAATGTTATCTATCGCGATTTAAAGGCTTCCAACATCCTACTTGACTCGGATTTCAATGCAAAGCTATCGGATTTTGGCTTGGCAAGAGATGGTCCTACCGGAGATAACACTCATGTTTCAACCAGAGTTATTGGAACTCATGGTTATGCTGCACCAGAGTACGTAGCTACAGGTCATTTGACACCAAGGAGTGATGTATACAGCTTTGGAGTTGTGTTGTTAGAGTTACTAACAGGAAGGCGTGTAGTTGAAGAAGAGAGACCTGGATTTTCAGAAGAAACACTGGTGGATTGGGCAAGGCCATTCCTGAGTGATAGCAGAAGAATTTTGAGAATCATGGATACAAGGTTGGGTGGTCAATACTCCAAGAAAGGAGCACAAGCTGCTGCAGCACTTGTACTTCAATGTCTGAATACTGATCCTAAATATAGACCAACCATGGTAAATGTTCTAGCTGCATTGGAAACATTAAATTCCACAAATTCATTCCCAAGGACTCCAAAATCTGGAACTGAGAATCATACAACAAAGCATTCTAGTCATTGCCAAAAGTCAGTTGGAAATACTAAGTAA 1164 0.4046 MGNSCRKPVAHVSSTSFFGSTKSQSNTKQKSNSPERKAHLETSASNVDKPISNNLKSFTFYDLKEATKNFRYENLVGEGGFGFVYKGWIDENTYAPTRPGTGIVVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSDGKNRLLVYEFMQKGSLENHLFRKGVQPVPWITRINIAVSVARGLTFLHSLDANVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEEERPGFSEETLVDWARPFLSDSRRILRIMDTRLGGQYSKKGAQAAAALVLQCLNTDPKYRPTMVNVLAALETLNSTNSFPRTPKSGTENHTTKHSSHCQKSVGNTK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1591 387 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1591 387 PANTHER OS01G0588500 PROTEIN-RELATED 17 378 - -
Apr9g1591 387 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Apr9g1591 387 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 378 - -
Apr9g1591 387 MobiDBLite consensus disorder prediction 16 31 - -
Apr9g1591 387 MobiDBLite consensus disorder prediction 16 46 - -
Apr9g1591 387 SUPERFAMILY Protein kinase-like (PK-like) 46 358 IPR011009 -
Apr9g1591 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Apr9g1591 387 CDD STKc_IRAK 76 354 - -
Apr9g1591 387 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Apr9g1591 387 MobiDBLite consensus disorder prediction 357 387 - -
Apr9g1591 387 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1591 387 Pfam Protein kinase domain 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1591 387 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1591 Apr-Chr9 25311541 25315418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1591 6 351 Glycoside Hydrolase AT3G07070 47.875 6.18e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr9g1591 Pkinase 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1591 - - gmx:102664409 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0035 2 590272 593730 Apr9g1591 9 25311541 25315418 PCT