Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1590 ATGCAAAATTACAGACCGATGAGTCAGCCTAAAATTAAGCGCAGAGTGGGTAAATATGAGGTAGGAAGGACCATTGGTGAGGGAACTTTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACAGGGGAGAATGTGGCTCTCAAAATTCTTGACAAAGAGAAGGTGCTCAAGCACAAGATGGCTGAACAGATCAGGCGGGAAGTAGCAACTATGAAGTTGATCAAGCATCCACATGTTGTTCGACTGTTTGAGGTCATGGGAAGCAAGACCAAAATATATATTGTTTTGGAGTATGTGACTGGGGGGGAGCTCTTTGACAAAATTGTAAACCATGGACGGATGAGTGAAAATGAAGCACGTAGATATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAGCCAGAAAATTTGCTACTAGACAATTATGGTAACCTTAAAGTATCGGATTTTGGGTTGAGTGCACTCTCTCAGCAAGTTAGGGATGACGGACTTCTCCATACTACATGTGGAACTCCAAACTATGTTGCTCCAGAGGTTCTTAACGATAGAGGCTATGATGGGGCAACTGCAGACTTGTGGTCATGTGGAGTGATTCTCTTTGTATTGGTTGCAGGTTACTTGCCTTTTGATGACCCAAATCTTATGAACCTGTATAAAAAAATCTCCGCTGCTGAATTTACTTGCCCCCCATGGCTTTCTTTCAGTGCCAGGAAATTGATAAGTCGAATCTTGGATCCTGATCCCACGACTCGTATTACTATACCTGAGATTTTGGATGATGAATGGTTTAAGAAAGATTATAAGCCTCCAGTTTTTGAGGAGAATGGGGAAACCAACCTTGATGATGTGGAGGCCGTCTTTAAAGATTCTGAAGAGCACCATGTAACAGAGAAGAAAGAAGAGCATCCAACAGCCATGAATGCATTTGAGTTAATTTCCATGTCCAAAGGGCTGAACCTCGAAAATTTGTTCGATATAGAGCAGGGATTTAAAAGGGAAACAAGGTTCACATCAAAATCCCCTGCAGATGAGATAATCAACAAGATTGAGGAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGATGAGGCTTGCCAATGTGAAAGCTGGAAGGAAGGGAAACCTTAATGTTGCCACAGAGATATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTACGAAAAGCAAAAGGCGATACATTGGAATTCCATAAGTTCTACAAAAAACTTTCAACATGCTTGGAGGATGTTGTTTGGAAAACAGAAGATGATATGCAAGAAGAAACAAAGTGA 1341 0.4161 MQNYRPMSQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGENVALKILDKEKVLKHKMAEQIRREVATMKLIKHPHVVRLFEVMGSKTKIYIVLEYVTGGELFDKIVNHGRMSENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDNYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLVAGYLPFDDPNLMNLYKKISAAEFTCPPWLSFSARKLISRILDPDPTTRITIPEILDDEWFKKDYKPPVFEENGETNLDDVEAVFKDSEEHHVTEKKEEHPTAMNAFELISMSKGLNLENLFDIEQGFKRETRFTSKSPADEIINKIEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKKLSTCLEDVVWKTEDDMQEETK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1590 446 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1590 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Apr9g1590 446 CDD STKc_SnRK3 18 273 - -
Apr9g1590 446 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Apr9g1590 446 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1590 446 Pfam NAF domain 314 373 IPR004041 GO:0007165
Apr9g1590 446 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1590 446 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Apr9g1590 446 SUPERFAMILY Protein kinase-like (PK-like) 15 293 IPR011009 -
Apr9g1590 446 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Apr9g1590 446 CDD CIPK_C 318 427 - -
Apr9g1590 446 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 8 438 - -
Apr9g1590 446 Gene3D Kinase associated domain 1, KA1 311 436 - -
Apr9g1590 446 Gene3D Phosphorylase Kinase; domain 1 8 98 - -
Apr9g1590 446 PANTHER - 8 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1590 Apr-Chr9 25297410 25304379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1590 11 417 CBL-interacting serine-threonine protein kinases AT2G26980 80.590 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g1590 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1590 - - gmx:100794566 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0036 2 609186 615534 Apr9g1590 9 25297410 25304379 PCT