Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1575 ATGCAGGCTGTCTGGTTGATGCTATTGTTGATGGTGGCTATTGCATTGGGCAATTCAGATATTGATGCACTCCTTGAATTCAAGAAGAGTATTCAGAATGACCCTTCTGGATTAGTTGTTAATTCTTGGGATTCCAAGTCTTTAGATTCCACTGGATGTCCTCAGAACTGGTATGGAATATTGTGTAGTGAAGGCAATGTTATATCAATCACTCTGGATAATGCTGGTTTGGTTGGCGAGTTTAATTTTCTTGCTATTTTTGGCCTTACAATGCTTCGCAACTTGTCAATTGTGAACAACCAGTTCACAGGAAATCTCTTACATGTTGGTCCAACGGAATCACTTGAATTTCTTGATTTGTCCCTCAACAAGTTTAATGGCTCATTACTCTCTAATGTTGTTCAACTGCGTAGTTTAGTGTATCTGAATCTTTCTTCAAATGAATTTGGAGGTACTCTTCCTATTGGATTTTACAAACTTGAGCGGCTGAAGTATTTAGATTTGCACACTAATAACTTTTCTGGGGATATTATGCATATCTTTTCTCAGATGGGCAGTGTGCTATATGTTGACTTAAGCAACAACAGGTTTTCTGGTACACTGGATTTGGGACTTGGAGACGGATCCTTTCTCTCCTCAATTCAATATTTAAATATTAGCCACAATTCCTTGACTGGTGAGCCATTTGCTCATGATGGTATGCCGTACCTGGACAATTTAGAGGTCTTTGATGCTAGTAATAACCAATTAGAGGGTAATATACCTTCCTTCACGTTTGTGGTATCTCTAAGGATTCTTCGACTTGCATGCAACCAGTTGACTGGCTCACTTCCACAAGCCTTATTGAAAGAGAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCAATTGGAATTATTACCTCAGTAACTCTGAGGAAGCTTAATTTATCTTCAAACCAATTGTCTGGCCCCTTACCTCTCAGGGTAGGCCACTGTGCCAGCATAGATTTGAGTAATAACACTCTATCAGGCAATGTGTCAAGGATCCGGTATTGGGGTAACTATGTGGAAGTTGTTCAGCTTAGTACAAACTCATTGACAGGAATGCTGCCAAACGAAACATCTCAATTTTTAAGGTTAACTGCACTTAAGGTATCTGGTAACTCATTGGAGGGCTTTCTCCCACCAGTCCTGGGAACATATCCAGAACTAAAAGAGATTGATCTTAGCCTTAACCAGCTTTCTGGGTTCGTCCTACCAAGCTTTTTTACCTCAACCAAATTGACTAATCTTAATCTCTCAAACAATAAATTTTCTGGATCAATTCCTTTTCAGTTTGAACCACCAAATGGTCCATTAGTTTCTGCTGAAAATTTTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGATTCTTCCTTCAAATATGAGTAAGCTTCACAATTTGGCATATCTCAATCTATGCAGCAACAAATTGGAAGGTAATATTCCTGGTGACCTTCCGCATGAGTTGAGAGTATTCAATGTGTCCTTTAATAATTTTTCTGGTGTTGTACCAGAAAATTTAATGCAGTTTCCTGAATCAGCATTTCATCCAGGAAATATGATGCTGACATTTCCACATTCGCAATCATTACCTAAAGATACTTCCAACCTAGGTTTGAGGGAACATCGGTCACACGAAAAATCCACAACTAGGAATGTCTTGATTGCATGTTTGGTTACTGGTGCTATTGTGATGACTTTTGTTGGTATAATAATTTTTAATAGGGTTCATCACAAAAAAGAAAGGACTTCTAAACAAAATGGCACAAAAGGCATAACCCAAGAGCGTACTTTCGCATCAAATATAGAGGCACCTTATAGAAATTTGGCAGCATTACCACCTTCTCAAAGGGGGTCTGCTGATGATGCAAGAAACATTCATCCAATGGAAAAGAAGCCGACAGATCTTGGCCATGATGACTTAATTAAGTATGAGGAAGCAATGTCTTCTCCAATGTCAATTTTGACACCTTCAAATCCGTCATCTTCTAAAAGCCATCAGTTTGAGTATGCTGGTTCCCTCAAAGTATCCTCCCCGGACAAACTGGTAGGAGATTTGCACCTATTTGATGGATCCTTGGTGCTAACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACACTCTACAAAGCAACACTTGACTCTGGTCATGCTTTGGCTGTCAAATGGTTAAGAGAAGGAATCACTAAAGGGAAAAAAGAGTTGGCAAGGGAAGTAAAGAAACTTGGGACTATCAAGCATCCAAACCTGGTTCCTATTCAGGGTTACTACCTAGGGCCAAAGGAACATGAGAAACTGATTATATCAAACTACATGAATGCACAATCTTTGGACATTTATCTCCACGAGGCAGATAAGAGAAATCTCCATCCTTTATCACTTGATGAAAGGCTGAGGGTGGCCATGGAGGTGGCGCGATGTCTGCATTACCTACATGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAATATTCTGCTACAAACTTCCAACAGGAATGTCCTCCTCACTGACTACAGCCTGCACAGGATACTCACTGCTGCAGGCACTGCTGAGCAAGTTCTGAATGCTGGTGCACTCGGTTATCGCCCTCCTGAGTTTGCTAGATCAAACAAACCGTGCCCTTCCTTGACAAGTGATGTCTATGCATTTGGAGTAGTCTTGTTGGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGAATTCCTGGGGTGGTTGATCTCACTGATTGGGTGAGGTTCTTAGCTGAACAAGATCGTTCTAGCCAATGCTTTGATAGGACTCTAATGGACAAGCACATTGGAGAAAGACCATGTAGAATTCTTGATGAAATGCTGAAGGTGGCTCTTAGATGCATTCTTCCAGCATCTGATAGGCCTGACATCAAAACTGTCTTTGATGATCTTTCAACAATAAGGTAG 3012 0.4057 MQAVWLMLLLMVAIALGNSDIDALLEFKKSIQNDPSGLVVNSWDSKSLDSTGCPQNWYGILCSEGNVISITLDNAGLVGEFNFLAIFGLTMLRNLSIVNNQFTGNLLHVGPTESLEFLDLSLNKFNGSLLSNVVQLRSLVYLNLSSNEFGGTLPIGFYKLERLKYLDLHTNNFSGDIMHIFSQMGSVLYVDLSNNRFSGTLDLGLGDGSFLSSIQYLNISHNSLTGEPFAHDGMPYLDNLEVFDASNNQLEGNIPSFTFVVSLRILRLACNQLTGSLPQALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNQLSGPLPLRVGHCASIDLSNNTLSGNVSRIRYWGNYVEVVQLSTNSLTGMLPNETSQFLRLTALKVSGNSLEGFLPPVLGTYPELKEIDLSLNQLSGFVLPSFFTSTKLTNLNLSNNKFSGSIPFQFEPPNGPLVSAENFSLVFLDLSHNNLSGILPSNMSKLHNLAYLNLCSNKLEGNIPGDLPHELRVFNVSFNNFSGVVPENLMQFPESAFHPGNMMLTFPHSQSLPKDTSNLGLREHRSHEKSTTRNVLIACLVTGAIVMTFVGIIIFNRVHHKKERTSKQNGTKGITQERTFASNIEAPYRNLAALPPSQRGSADDARNIHPMEKKPTDLGHDDLIKYEEAMSSPMSILTPSNPSSSKSHQFEYAGSLKVSSPDKLVGDLHLFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHALAVKWLREGITKGKKELAREVKKLGTIKHPNLVPIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEADKRNLHPLSLDERLRVAMEVARCLHYLHDEKAIPHGNLKSTNILLQTSNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFARSNKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSSQCFDRTLMDKHIGERPCRILDEMLKVALRCILPASDRPDIKTVFDDLSTIR* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1575 1003 Gene3D Transferase(Phosphotransferase) domain 1 798 1003 - -
Apr9g1575 1003 Gene3D Ribonuclease Inhibitor 19 180 IPR032675 -
Apr9g1575 1003 ProSiteProfiles Protein kinase domain profile. 720 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1575 1003 MobiDBLite consensus disorder prediction 630 654 - -
Apr9g1575 1003 Gene3D Ribonuclease Inhibitor 357 451 IPR032675 -
Apr9g1575 1003 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Apr9g1575 1003 Gene3D Ribonuclease Inhibitor 181 356 IPR032675 -
Apr9g1575 1003 Gene3D Phosphorylase Kinase; domain 1 719 797 - -
Apr9g1575 1003 SUPERFAMILY Protein kinase-like (PK-like) 723 999 IPR011009 -
Apr9g1575 1003 PANTHER OS07G0626500 PROTEIN 1 1002 - -
Apr9g1575 1003 SUPERFAMILY L domain-like 110 523 - -
Apr9g1575 1003 ProSiteProfiles Leucine-rich repeat profile. 460 481 IPR001611 GO:0005515
Apr9g1575 1003 Pfam Protein tyrosine and serine/threonine kinase 724 995 IPR001245 GO:0004672|GO:0006468
Apr9g1575 1003 Gene3D Ribonuclease Inhibitor 454 547 IPR032675 -
Apr9g1575 1003 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1575 Apr-Chr9 25187711 25191778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1575 3 1003 Receptor kinase-like Gene Family AT5G01890 28.762 1.38e-71 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g1575 PK_Tyr_Ser-Thr 4.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1575 - - ccaj:109792420 1698.33