Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1571 ATGGAAGATAAACTAGCAACAAAAAGTGAAGGGCAGCCCATAAGATGTAAAGCTGCGGTTTGTCGCAAACCAGGTGAGCCACTTGTTATTGAGGAGATTATTGTGGCGCCACCAATGCCTCGTGAAGTTCGGATTCGGATTATATGCACATCTCTTTGTCAGAGTGATGTTACTTTTTGGAAAATGAAGGTACCTCCTGCCATTTGTCCCAGAATTCTGGGTCACGAGGCTATTGGGGTTGTGGAAAGTGTAGGAGAGGATGTAACTGAAGTTACAAAAGGAGATGTGGTTGTTCCAACTTTCTTAGCTGATTGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAACCTCTGTTCAAAGTTTCCTTTTGAGGTGTCTCCATGGATGCCCAGATATGGCACCTCTAGATTCACTGATTCAAAAGGAGACATCATATATCATTTCCTATGTGTTTCTAGTTTTAGCGAGTACACTGTGGTTGACATTGTCAATCTAACAAAGATTGATCCGGCAACACCACCCAACAGGGCATGCCTCCTCAGCTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAGAACAGCTGGCGTGGAGCCAGGGTCTACAGTTGCTATTTTTGGGCTGGGAAGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACCAGGATTATAGGTGTGGATGTCAACACAGAAAAATATGAAATTGGAAAGAAGTTTGGAGTGACAGACTTTGTTCATGCTGTCCAATCTGAAAACAAATCTGTGAGCCAGGTCATCATAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAATAGTTTTAGGGGTGGACAAGCCAGGATCCAAGATGAGCTTTAGCTCTAGTGAGGTCCTTTGTGATGGGAAGAGCCTCATGGGAGCTTTATTTGGAGGACTCAAACCAAAGTCTCATGTACCCATTCTCCTTAAACGCTACATGGACAAGGAACTGAATTTGGATGAGTTTGTCACACACGAGGTGGAGTTCAAGGATATTAATAAAGCTTTTGATTTATTAATTGAAGGACAATGTCTCCGATGTGTGATTTGGATGGACCAATGA 1164 0.4381 MEDKLATKSEGQPIRCKAAVCRKPGEPLVIEEIIVAPPMPREVRIRIICTSLCQSDVTFWKMKVPPAICPRILGHEAIGVVESVGEDVTEVTKGDVVVPTFLADCGECIDCKSSKSNLCSKFPFEVSPWMPRYGTSRFTDSKGDIIYHFLCVSSFSEYTVVDIVNLTKIDPATPPNRACLLSCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDVNTEKYEIGKKFGVTDFVHAVQSENKSVSQVIIEMTGGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDKPGSKMSFSSSEVLCDGKSLMGALFGGLKPKSHVPILLKRYMDKELNLDEFVTHEVEFKDINKAFDLLIEGQCLRCVIWMDQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1571 387 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 384 - -
Apr9g1571 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 348 IPR036291 -
Apr9g1571 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Apr9g1571 387 SUPERFAMILY GroES-like 9 194 IPR011032 -
Apr9g1571 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Apr9g1571 387 Gene3D - 188 328 - -
Apr9g1571 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Apr9g1571 387 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
Apr9g1571 387 PANTHER ALCOHOL DEHYDROGENASE 9 384 - -
Apr9g1571 387 Gene3D - 19 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1571 Apr-Chr9 25157939 25160815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1571 41 334 Monolignol Biosynthesis Gene Families AT4G37990 23.569 1.77e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1571 K00121 - gmx:100806887 712.605