Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1540 ATGAAACCCGCAAATGGTTTTCTGTTGTTCTTGCTGTTGCTGGAGTATGTTTGTTGTAATGTGGAATCCAAGTGTATGAAGGGATGTCACGTAGCTTTAGCTTCCTACTATGTAAGACCCAAGTTTCTATCCTTAGATAATATAATGCGCTTGATGCAATCAAAAATTCTGTCCACTTCTGATGTTATAAGGAGCTACAATAAAGACAAAATATTGAATGATAATGTGCCATCCTTTTCCAGAGTCAATATTCCATTCCCCTGTGACTGTATTGGAGATGAATTTCTGGGACATGTGTTTGAGTACTCAACTGCTGCAGGTGATACCTATGATTTGATTGCCAAGGTGAAATATGCCAATCTGACAACAGTTGAGCTTTTGCAAAGGTTCAATAGTTATGATCAAGATGATATACCGGCTAATTCAAAGCTTAATGTCACTGTCAATTGTTATTGTGGGAACAGCCAGATTTCAAAAGATTATGGGATGTTTATTACCTATCCACTAAGGCCAGGGAATACTTTGCAGGATATTTCCAATGAGACCAATCTTGATGCACATTTACTGCAGAGTTACAATCCTGGTGTTAATTTCAGCAGTGAGAGTGGGATAGTTTTCATACCAGGAAGAGATCAAAATGGAGACTATGTTCCCTTGTATCCTAGGTCAGGTCTAGCTACGGGTGCTGCTGTTGGAATAACCATAGCGGCAATATGCGGGCTTATATTATTAGTAATTTTCATGTATGTTAAATACTTCCAGAAGAAGGAAGGAGAGAAAGCTAAATTGCCGTCAGAAAGTTCTGTAGCGTTTTCAACTCAAGATGCCTCTGGAAGTGGAGAATATGAAACTTCAGGATCTACTGGGCCTGCAAATGCTAGTGCTGCTGGCCTCACAGGCATTATGGTGGCTAAATCAACGGAGTTCTCATATCAAGAACTGGCCAAGGCTACAAATAACTTTAGCTTGGATAATAAAATTGGTCAGGGAGGATTTGGAGCTGTCTATTATGCAGAACTGAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCATCAACAGAATTTCTTTGTGAATTGAAGGTCTTAACACACGTTCATCACTTAAATCTGGTGCGCTTGATTGGATATTGTGTTGAGGGATCTCTTTTCCTTGTATATGAATATATTGACAACGGAAACTTAGGCCAATATTTGCATGGAACTGGTAAAGACCCTTTGCCATGGTCTAGCCGAGTGCAAATTGCTCTAGATTCAGCAAGAGGCCTTGAGTACATTCACGAGCACACTGTGCCTGTGTATATCCATCGTGATGTAAAGTCAGCAAATATATTAATAGACAAACACTTCCGTGGAAAGGTTGCTGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAGCTCCACACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTGTTCTGAAAACAGGTGAATCTGTTGCTGAATCCAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGCAATCCTTTAGAAGGCATTCACAAACTGGTTGATCCAAGGCTTGGAGAAAACTATCCAATTGATTCAGTTCTGAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAATCCACTACTACGCCCAAGCATGAGGTCTATAGTTGTTGCTCTTATGACACTTGCATCACCTACTGAGGATTGCGATGATGACACTATTTCCTACGAAAATCAAACCCTGATAAATCTATTGTCTGTAAGATGA 1863 0.3972 MKPANGFLLFLLLLEYVCCNVESKCMKGCHVALASYYVRPKFLSLDNIMRLMQSKILSTSDVIRSYNKDKILNDNVPSFSRVNIPFPCDCIGDEFLGHVFEYSTAAGDTYDLIAKVKYANLTTVELLQRFNSYDQDDIPANSKLNVTVNCYCGNSQISKDYGMFITYPLRPGNTLQDISNETNLDAHLLQSYNPGVNFSSESGIVFIPGRDQNGDYVPLYPRSGLATGAAVGITIAAICGLILLVIFMYVKYFQKKEGEKAKLPSESSVAFSTQDASGSGEYETSGSTGPANASAAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKHFRGKVADFGLTKLIEVGSSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGESVAESKGLVALFEEALNQSNPLEGIHKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSIVVALMTLASPTEDCDDDTISYENQTLINLLSVR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1540 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Apr9g1540 620 SUPERFAMILY Protein kinase-like (PK-like) 303 591 IPR011009 -
Apr9g1540 620 Gene3D Transferase(Phosphotransferase) domain 1 392 613 - -
Apr9g1540 620 Pfam Protein tyrosine and serine/threonine kinase 322 588 IPR001245 GO:0004672|GO:0006468
Apr9g1540 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 620 IPR044812 GO:0019199|GO:0045087
Apr9g1540 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 9 620 - -
Apr9g1540 620 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Apr9g1540 620 Gene3D Phosphorylase Kinase; domain 1 301 391 - -
Apr9g1540 620 SMART serkin_6 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1540 620 ProSiteProfiles Protein kinase domain profile. 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1540 Apr-Chr9 24898086 24902507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1540 11 620 Receptor kinase-like Gene Family AT3G21630 55.032 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr9g1540 PK_Tyr_Ser-Thr 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1540 - K13429 gmx:100792559 1016.53