Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1539 ATGGAACACAGATTCAGATTATCAATTTTCTTCTTGTTATGGGCTTCTATGTGGTTCAGTGCAGAATCAAAGTGTAGGGGTTGTGATTTAGCTCTAGCTTCCTACTATCTAGCAGAAGATAACTTGACATATATATCAAAGATTATGGAATCCATGGTTCTTTCAAAATCTGAAGACATTGTGAGTTATAACAATGGCACCATAAAAGACAAAGACACTCTCTCGGCCTTTACCAGAGTGAACGTTCCATTCCCTTGTGATTGCATTGATGATGAGTTTCTTGGTCATATATTCCAATACGCGCTTGGAGAAGGAGAAACTTACACGTCCATTGCCACTCAGAACTACTCCAATTTGACCACTGATGAGTGGTTGCAGAGTTTCAACAGCTATTCACCAACTAGTATTCCTGATAGTGGAATGCTTAATGTCACCATTAACTGTTCTTGCGGGAATAGTGATGTTTCCAAGGATTATGGATTGTTCATTACATACCCGCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAATGAGACGAAAATTGAGCCTGAGATCCTGCAGAAGTACAATCCAGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCCGGGAAAGACCAAAATAATATCTATGTGCCCCTTCACCTGAGGACAGTCGGTCTTTCAGGTGGGGCTATTGCTGGAATATCTGTTGGAGTAGTAACGGGACTTCTTCTGTCATCATTTTGCTTGTATGTTACGTGTTACCAGAGGAAGAAGGTATGGAAGAAGAAATTTCTCTTGGAAGAATCCAGCTTGAAGACTGCCCAAGTTAAAAATGCATCTGGTAATGCTAAACACGAAACTTCAGTTTCTGGTGGTCCTGCTGCAGCAGGTGGTACTGACACCATTGGCATTAGGGTGGAGAAATCAGCCGAGTTTTCATACGAAGAACTAGCCAATGCCACAAATAACTTCAGTATGGCTAACAAAATTGGTCAAGGTGGCTTTGGGGAGGTCTATTATGCAGAGCTGAATGGCGAGAGAGCTGCAATAAAAAAGATGGACATGCAAGCATCAAAAGCATTTCTTGCTGAACTGAAAGTGTTGACTCGTGTTCATCACTTGAACCTGGTACCCTTGATTGGATATTGCATTGAGGGCTCCCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGCCAACATCTACATAGATCAGATAGAGAACCTTTGCCATGGTCTACCCGGGTTCAAATTGCCCTGGATTCAGCCAGAGGTCTTCAATACATTCATGAGCATACAGTTCCTGTATATATCCATCGTGACATAAAGTCAGAAAATATTTTATTAGATAGAAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGCTGATTGATGTTGGAAGTTCTTCACTTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAATATGCATACGGCAATGTTTCTCCAAAAGTAGACGTCTACGCATTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCCTTGATAAAGGGTGGTGGTGCATCTGGTGTTGAATTAAAGGGCCTTGTATCTTTGTTTGATGAAGTTTTTGCTCAGCCTGATCCCACAGATGGTCTTAAAAAATTGGTTGATCCTAGGCTTGGAGATAACTTCTCAATCGATTCATTTCTCAAGATGGCACAACTTGCTAAAGCATGCACAGAGAGCGATCCACAACAACGTCCAAATATGAGTTCAGTTGTGGTTGCTCTTACAGCACTTACTTCAACTACTGAGGATTGGGATATTGCTTCCATCATTGAAATTCCAGCTCTTGCAAATCTAATGTCTGGAAAATAG 1866 0.4105 MEHRFRLSIFFLLWASMWFSAESKCRGCDLALASYYLAEDNLTYISKIMESMVLSKSEDIVSYNNGTIKDKDTLSAFTRVNVPFPCDCIDDEFLGHIFQYALGEGETYTSIATQNYSNLTTDEWLQSFNSYSPTSIPDSGMLNVTINCSCGNSDVSKDYGLFITYPLRPEDSLQSIANETKIEPEILQKYNPGVNFSQGSGLVYIPGKDQNNIYVPLHLRTVGLSGGAIAGISVGVVTGLLLSSFCLYVTCYQRKKVWKKKFLLEESSLKTAQVKNASGNAKHETSVSGGPAAAGGTDTIGIRVEKSAEFSYEELANATNNFSMANKIGQGGFGEVYYAELNGERAAIKKMDMQASKAFLAELKVLTRVHHLNLVPLIGYCIEGSLFLVYEYIENGNLSQHLHRSDREPLPWSTRVQIALDSARGLQYIHEHTVPVYIHRDIKSENILLDRNFCAKVADFGLTKLIDVGSSSLPTANMAGTFGYMPPEYAYGNVSPKVDVYAFGVVLYELISAKEALIKGGGASGVELKGLVSLFDEVFAQPDPTDGLKKLVDPRLGDNFSIDSFLKMAQLAKACTESDPQQRPNMSSVVVALTALTSTTEDWDIASIIEIPALANLMSGK* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1539 621 Pfam Protein tyrosine and serine/threonine kinase 324 592 IPR001245 GO:0004672|GO:0006468
Apr9g1539 621 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Apr9g1539 621 CDD STKc_IRAK 328 590 - -
Apr9g1539 621 PANTHER LYSM RECEPTOR KINASE 1B 4 621 - -
Apr9g1539 621 Gene3D Transferase(Phosphotransferase) domain 1 393 610 - -
Apr9g1539 621 Gene3D Phosphorylase Kinase; domain 1 296 392 - -
Apr9g1539 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Apr9g1539 621 SUPERFAMILY Protein kinase-like (PK-like) 305 593 IPR011009 -
Apr9g1539 621 SMART serkin_6 322 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1539 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 621 IPR044812 GO:0019199|GO:0045087
Apr9g1539 621 ProSiteProfiles Protein kinase domain profile. 322 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1539 Apr-Chr9 24891174 24896603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1539 1 621 Receptor kinase-like Gene Family AT3G21630 55.836 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr9g1539 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1539 - K13429 gmx:100803042 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1539 9 24891174 24896603 Apr9g1539 9 24891174 24896603 ECH