Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1527 ATGGCCACATACACAATCTCGTGTGCCACCACCATAACACTAGTACTATTGCTGGTTACTTCCTCCATCCAAAAATCACGAGCACAACAAGCGTACGTTAACAACAAACAACTACAATGTGACAATGAATACAACGAGACAAAGGGAAATCTCTGCAACAGCATCCCTTCATGCAATTCATACCTAACCTTCAAATCATCCCCACCAGAATACAGCACACCATCTTCCATCTCTTACCTTCTCAACGCAACACCCTCTCTCATAGCCACCGCCAACAACATCACCGACGTTCAATCCATCCCCGCCGATACCATGGTGACAGTTCCCATCAATTGCTCCTGTTCTGGCCCTTACTACCAACACAACGCTTCCTACACCTTGAAGACCCTTGGAGAAACCTACTTCTCCATTGCCAACATCACCTACCGGGCTCTCACCACGTGTCAAGCACTCATGGCTCAGAACTCCTTTGGGGAACGCAACCTTACCGCTGGTCTCAACCTGCACGTGCCTCTCAGGTGTGCGTGTCCAACCCAGAAACAGCGTGATGCTGGATTCAAGTACTTGCTCACGTACTTGGTGTCTCAAGGGGAATCAATTTCTTCCATCGCTGATATCTTCGGCGTTGATGAACAGAGCGTTTTGGATGCTAACGAGCTTACTTCTTCCTCTATTATTTACTACTTTACACCAATTTCGGTTCCTCTGAAAACAGAGCCTCCGACGAAAATACAGATAGCGGCGCCTCCGACGGAGTCTCCGCCGCCTCCGGCGGGTAACGGAGGTTCCGGGTCTTCCAAGAAATGGGTCATTGTTGGAGTCACGGTTGGGGTTGCTCTGTTGGTGATTCTTGTTCTAGCTCTGTTTTTCCTCTGTTTCTATCGCCGAAGGCGGCAGCCGGAGCTTCCGCCGGCGAAGCCTTTCTCGGCTTCTTCCCCAACCGAAGCCACCAAGAAGGGGTGGGATACTACCCCAACAACGCAATCGATGTCTATTTCTTCTGAAGGGATTCGCTATGCGATTGAGTCGTTGACTGTGTACAAGTTTGAGGACTTGCAGAATGCAACAGGGTTTTTCCGTGAAGATAACAGGATCAAGGGATCTGTTTATAGAGCTTCTTTCAAGGGAGATTATGCTGCTGTTAAGATTCTCAAAGGAGATGTCTCAGCTGAGATCAACATTCTGAAGAAGATTAACCACACCAATGTTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACCTATCTTGTGTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCACACTGAGAAGAAGTACCAGAATCCCATGTCTTTGAGTTGGTTGCAAAGGGTTCAGATTGCTCATGATATTGCTGATGCTTTGAATTACCTTCATAACTATACCAACCCTCCGCATATTCATAAGAATTTGAAGAGTGGTAATGTTCTTTTGGATGGGAATTTTAGAGCCAAAGTTTCAAACTTTGGATTGGCAAGAGCTGTGGAGGATCAAGGGGATGGAGGGTTTCAATTGACAAGGCATGTGGTGGGAACTCAAGGTTACATGCCACCTGAGTATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTCTTTGCATTTGGGGTTGTGATTTTGGAGCTTCTTTCGGGAAGAGAAGCCGTTGGTGGAGACAAGAATGGATCGGGGGAGCAGATGCTGTCAGCAACTGTGAATCATGTTCTTGAAGGAGATAATGTTAGGGAGAAACTTAAAGGTTTCATGGATCCAACTTTGAGGGATGAATACCCTTTGGATTTGGCATACTCTATGGCTGAGATTGCCAAACGATGTGTTGCTCGTGACCTAAATTCAAGACCAAACATTTCTGAGGTTTTCATGACTATGTCTAAGATTCAATCCTCTACTTTGGATTGGGATCCATCTGATGAGCTTGATCGATCCAGATCTGTTAGCCAAATCTCTGATAGCAGATAG 1974 0.458 MATYTISCATTITLVLLLVTSSIQKSRAQQAYVNNKQLQCDNEYNETKGNLCNSIPSCNSYLTFKSSPPEYSTPSSISYLLNATPSLIATANNITDVQSIPADTMVTVPINCSCSGPYYQHNASYTLKTLGETYFSIANITYRALTTCQALMAQNSFGERNLTAGLNLHVPLRCACPTQKQRDAGFKYLLTYLVSQGESISSIADIFGVDEQSVLDANELTSSSIIYYFTPISVPLKTEPPTKIQIAAPPTESPPPPAGNGGSGSSKKWVIVGVTVGVALLVILVLALFFLCFYRRRRQPELPPAKPFSASSPTEATKKGWDTTPTTQSMSISSEGIRYAIESLTVYKFEDLQNATGFFREDNRIKGSVYRASFKGDYAAVKILKGDVSAEINILKKINHTNVIRLSGFCVYKGNTYLVYEFAENDSLDDWLHTEKKYQNPMSLSWLQRVQIAHDIADALNYLHNYTNPPHIHKNLKSGNVLLDGNFRAKVSNFGLARAVEDQGDGGFQLTRHVVGTQGYMPPEYIENGLITPKMDVFAFGVVILELLSGREAVGGDKNGSGEQMLSATVNHVLEGDNVREKLKGFMDPTLRDEYPLDLAYSMAEIAKRCVARDLNSRPNISEVFMTMSKIQSSTLDWDPSDELDRSRSVSQISDSR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1527 657 MobiDBLite consensus disorder prediction 310 329 - -
Apr9g1527 657 Gene3D LysM domain 178 245 IPR036779 -
Apr9g1527 657 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 16 648 - -
Apr9g1527 657 SMART LysM_2 61 109 IPR018392 -
Apr9g1527 657 SMART LysM_2 191 235 IPR018392 -
Apr9g1527 657 Gene3D Transferase(Phosphotransferase) domain 1 423 648 - -
Apr9g1527 657 MobiDBLite consensus disorder prediction 639 657 - -
Apr9g1527 657 Gene3D Phosphorylase Kinase; domain 1 322 422 - -
Apr9g1527 657 CDD LysM 191 227 IPR018392 -
Apr9g1527 657 ProSiteProfiles LysM domain profile. 190 234 IPR018392 -
Apr9g1527 657 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1527 657 MobiDBLite consensus disorder prediction 303 329 - -
Apr9g1527 657 MobiDBLite consensus disorder prediction 244 263 - -
Apr9g1527 657 MobiDBLite consensus disorder prediction 635 657 - -
Apr9g1527 657 SUPERFAMILY Protein kinase-like (PK-like) 342 626 IPR011009 -
Apr9g1527 657 Pfam Protein kinase domain 386 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1527 657 Pfam LysM domain 192 234 IPR018392 -
Apr9g1527 657 PANTHER PROTEIN LYK5 16 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1527 Apr-Chr9 24791570 24794824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1527 1 650 Receptor kinase-like Gene Family AT2G33580 54.653 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr9g1527 Pkinase 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1527 - - gmx:100818534 999.964