Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1522 ATGTCCACAAAGCTTGTATCATTTCGATTGATCCTCATCACCTTCTTCTGTTCACTTTTAAGGCTATCTTCCTTCCAAGTTTCTTGCACTTTCGTGTTTGCTTCTTTTTCCTTTGCTGCCACTACTGCTACATATGGTTATGAAGCTGCTGAAGATCATAATAACAATGAAGCAACTACACTATTAGAGTGGAAGGCCACCCTTGATAACCAAAGCCAAGCTTCCTTGTCTTCTTGGTCTACCTTTAACAATCCATGCAAATGGGAAGGAATTGTTTGTGATGAATCCAACTCTTTCAGCACTATAAATGTTACCAAATTTGGACTAAAAGGTACCCTTTTCACTCTCAACTTCTCATCATTTCCTAAGCTGCTCAACCTGGATATAAGTTACAACTCTTTTCATGGATCTATTCCTCACCAAATTAGTAACTTGTCAAGAATTTCTCAATTGAAAATGGGTCATAATCTTTTCAGTGGTTCCATCCCCCAAGAAATAGGGGCCCTGAAAAATCTAAATCTGCTTGATATTGCAAGGTGTAAGCTCACTGGATCAATCCCTATTTCCATAATGAAGTTGGCCAAATTGTCTTATCTAGATTTAGCTGGTAATCAACTTTCTGGCCACATTCCTCAGGAGATAGGGGAATTGGATAGCTTGAAGCATCTGTTCTTGAAAGCAAATAGACTTTCTGGTTCCATTCCACCTACAATTGGAAAGTTGACAAATCTTGTTTTACTTGATTTGTCTACTAACTCTCTGTCAGGTGCAATCCCTTCAATTAGAAACTTGAGAAATTTAGAACAGCTTTTCCTCTTTAATAACCATCTCTCTGGGCCAATCCCATCTTCCTTAGGAGATTTGACCAATTTGAGGCAGCTTCAACTTACTGGTAATAAACTTGATGGATCAATTCCATCTACCATTGGAAACTTGACAAAACTCACTGAGTTGTCCATGTCTCTAAACAAGCTTTCTGGATCAATTCCTGCATCCATAGGAAACTTGATCAATCTAGAAAAGCTTAGCCTTTCGATAAACAATCTTTCTGGACCTATTCCATCTACTTTTGGAAATTTGACAAAGCTCACCTACCTCTTGCTTTATATGAACAACCTTAATGGTAGTTTTCCTGCGGCAATAAATAACCTTACCAATTTAGAAGCCTTACAACTAAGCTCAAATCATTTCACTGGCCCTTTGCCACAACATATTTGCCTTGGTGGATCACTTACAAATTTTTCTGCTAATAAGAATCATTTCATTGGTCCAATTCCAACAAGCATGAAGAATTGCTCCACACTTTTTAGGCTCAACCTTGCAGAAAATATGTTGATGGGAAATATTTCAAATGACTTTGGTATATATCCAAATTTAAACTACATTGATCTAAGTAGCAATTGTTTTTATGGCCAACTTTCACCAAATTGGACCAAAAGCCATTATCTCATAGGCCTAAAGATCTCATACAACAATTTATCAGGTGGTATACCGCCAGAGTTAGGTCAGGTACCGAATTTACAAGAACTTGAACTGTCTTCAAATCATCTAACAGGGAAAATTCCAGAAGAACTTGGGAATTTGACCTCATTGTTTCAACTCTCCATGAGTAACAATGAACTTTCAGGCAACATTCCCACAGAAATAGGATCCTTGAAACGACTTCAATACTTGAATCTTGCAGCGAACAATTTAAGTGGCTCAATCCCAAAACTGGTTGGAGGGTTGTTTAATTTAATTAACTTGAACTTGAGTAAGAACAAATTCTCAGAAAGTATTCCCTCTGAATTCAACCAATTGCAATCTCTTCAAGATCTCGATCTTAGTCAGAATTTTTTAAATGGGAAAATTCCAGCAACCCTAGGAAATTTGAAAAAACTAGAAACGTTGAACCTCTCACACAATAATCTATCTGGAACCATTCCATCTAGTTTTAAGGATATGTTGAGCTTGACAAATGTTGACATATCTAGCAACCAATTAGAGGGTTCAATTCCTAACAATCCAGTCTTTCTTAAGGCTCCATCTGAAGCTCTGAAAAACAACAAAGGCTTGTGTGGTAATGCTTCTGAGTTGGTGCCCTGCCAAGAGTTGAGTCACAACCCGCATGGTAAAAAGCAAAGTGTCATGATGTTGGCACTACTCCTTACTTTGGGAGCACTATTGCTAGTAATGTTTGTAGTTGGAGTTTCATTATATTTTTATTGGCAAAGAGGAAGAAAAATAAAAAAGCATACAAGACAAGAACAAACTCGAGATCTTTTTTCTATATGGAGTTATGATGGAAAAATAGTGTATGAAAATATCATTGAAGCCACAGAGGATTTTGATGACAAATATCTCATTGGAGAAGGAGGGTCTGCAGCTGTTTACAAGGCAAAATTACCCACAGGACAGACAGTTGCTGTGAAAAAACTTCATGCTGCAGTTGATGGGGAAATGCTCAATATTAAATCTTTTACATCTGAAGTTCAAGCTTTAACAGAAATCAAACATCGTAACATTGTAAAGTTGTTTGGATTTTGTTCACATCCACGCTACTCCTTACTAGTTTATGAGTTCTTAGATGGTGGCAGCTTGGATAAAGCACTAAACAAAGACACAAATGCAGCAATATTTGATTGGAATAGGAGAGTGAATGTTGTTAAAGGTGTGACAAATGCTTTGTACTATATGCATCATGGTTGCTCTCCTCCTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGAATATGAAGCTCGCATCTCAGACTTTGGAACAGCTAAGATTTTAAATCCTGATTCACCCAATTTAACTTCATTTGCAGGCACCTATGGGTATACTGCACCAGAGCTTGCTTATGCTACAGAAGTGAATGAGAAATGTGATGTCTTTAGTTTTGGAGTACTTTGTTTGGAAATAATAATGGGAAATCACCCAGGAGATCTCATTTTTTCAATGTATTCATCCTCTGCAACAACAGTAACATCTAATTTGCTGTTGAAGGATGTGGTGGACCGGCGTCTTCCTCATCCAAAGATGCCAGTTGTTAAGGAGGTGATCTTGATTGCAAAAATAGCATTTGCTTGCTTGAATGAAAGTCCACCTTCACGCCCCACCATGGAAGATGTGTATAACATGTTTGTGATGTCAAAATTACCTTCAATGAAGGAGCAATTCCACACCATTGCACTTGGACAACTTCTAAATTATTAA 3210 0.3741 MSTKLVSFRLILITFFCSLLRLSSFQVSCTFVFASFSFAATTATYGYEAAEDHNNNEATTLLEWKATLDNQSQASLSSWSTFNNPCKWEGIVCDESNSFSTINVTKFGLKGTLFTLNFSSFPKLLNLDISYNSFHGSIPHQISNLSRISQLKMGHNLFSGSIPQEIGALKNLNLLDIARCKLTGSIPISIMKLAKLSYLDLAGNQLSGHIPQEIGELDSLKHLFLKANRLSGSIPPTIGKLTNLVLLDLSTNSLSGAIPSIRNLRNLEQLFLFNNHLSGPIPSSLGDLTNLRQLQLTGNKLDGSIPSTIGNLTKLTELSMSLNKLSGSIPASIGNLINLEKLSLSINNLSGPIPSTFGNLTKLTYLLLYMNNLNGSFPAAINNLTNLEALQLSSNHFTGPLPQHICLGGSLTNFSANKNHFIGPIPTSMKNCSTLFRLNLAENMLMGNISNDFGIYPNLNYIDLSSNCFYGQLSPNWTKSHYLIGLKISYNNLSGGIPPELGQVPNLQELELSSNHLTGKIPEELGNLTSLFQLSMSNNELSGNIPTEIGSLKRLQYLNLAANNLSGSIPKLVGGLFNLINLNLSKNKFSESIPSEFNQLQSLQDLDLSQNFLNGKIPATLGNLKKLETLNLSHNNLSGTIPSSFKDMLSLTNVDISSNQLEGSIPNNPVFLKAPSEALKNNKGLCGNASELVPCQELSHNPHGKKQSVMMLALLLTLGALLLVMFVVGVSLYFYWQRGRKIKKHTRQEQTRDLFSIWSYDGKIVYENIIEATEDFDDKYLIGEGGSAAVYKAKLPTGQTVAVKKLHAAVDGEMLNIKSFTSEVQALTEIKHRNIVKLFGFCSHPRYSLLVYEFLDGGSLDKALNKDTNAAIFDWNRRVNVVKGVTNALYYMHHGCSPPIVHRDISSKNVLIDLEYEARISDFGTAKILNPDSPNLTSFAGTYGYTAPELAYATEVNEKCDVFSFGVLCLEIIMGNHPGDLIFSMYSSSATTVTSNLLLKDVVDRRLPHPKMPVVKEVILIAKIAFACLNESPPSRPTMEDVYNMFVMSKLPSMKEQFHTIALGQLLNY* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1522 1069 Gene3D Ribonuclease Inhibitor 208 262 IPR032675 -
Apr9g1522 1069 Pfam Protein kinase domain 778 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1522 1069 ProSitePatterns Tyrosine protein kinases specific active-site signature. 900 912 IPR008266 GO:0004672|GO:0006468
Apr9g1522 1069 SMART LRR_typ_2 193 217 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 288 312 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 241 263 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 600 623 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 504 528 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 264 287 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 624 647 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 552 575 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 336 359 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 384 408 IPR003591 -
Apr9g1522 1069 SMART LRR_typ_2 576 599 IPR003591 -
Apr9g1522 1069 Pfam Leucine rich repeat N-terminal domain 54 94 IPR013210 -
Apr9g1522 1069 SUPERFAMILY RNI-like 305 666 - -
Apr9g1522 1069 Gene3D Phosphorylase Kinase; domain 1 737 854 - -
Apr9g1522 1069 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 183 1067 - -
Apr9g1522 1069 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 194 - -
Apr9g1522 1069 ProSitePatterns Protein kinases ATP-binding region signature. 782 805 IPR017441 GO:0005524
Apr9g1522 1069 ProSiteProfiles Protein kinase domain profile. 776 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1522 1069 ProSiteProfiles Leucine-rich repeat profile. 626 648 IPR001611 GO:0005515
Apr9g1522 1069 Gene3D Ribonuclease Inhibitor 263 409 IPR032675 -
Apr9g1522 1069 Gene3D Transferase(Phosphotransferase) domain 1 855 1060 - -
Apr9g1522 1069 PRINTS Leucine-rich repeat signature 244 257 - -
Apr9g1522 1069 PRINTS Leucine-rich repeat signature 624 637 - -
Apr9g1522 1069 SMART LRR_sd22_2 241 269 - -
Apr9g1522 1069 SMART LRR_sd22_2 504 527 - -
Apr9g1522 1069 SMART LRR_sd22_2 193 219 - -
Apr9g1522 1069 SMART LRR_sd22_2 600 632 - -
Apr9g1522 1069 SMART LRR_sd22_2 360 386 - -
Apr9g1522 1069 SMART LRR_sd22_2 312 338 - -
Apr9g1522 1069 SUPERFAMILY L domain-like 69 402 - -
Apr9g1522 1069 Pfam Leucine Rich Repeat 626 646 IPR001611 GO:0005515
Apr9g1522 1069 Gene3D Ribonuclease Inhibitor 53 207 IPR032675 -
Apr9g1522 1069 Gene3D Ribonuclease Inhibitor 410 703 IPR032675 -
Apr9g1522 1069 SUPERFAMILY Protein kinase-like (PK-like) 757 1047 IPR011009 -
Apr9g1522 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 194 - -
Apr9g1522 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 183 1067 - -
Apr9g1522 1069 Pfam Leucine rich repeat 338 397 IPR001611 GO:0005515
Apr9g1522 1069 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Apr9g1522 1069 Pfam Leucine rich repeat 554 611 IPR001611 GO:0005515
Apr9g1522 1069 Pfam Leucine rich repeat 486 541 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1522 Apr-Chr9 24749869 24754536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1522 57 948 Receptor kinase-like Gene Family AT4G08850 46.179 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr9g1522 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1522 - - gmx:100800924 1423.68