Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1520 ATGGGGTTCACTAAACTTCTATTATATCTGATTGTCACCACTTTGCTCAGTTCACTCTCAAGGTTCCAATCCTCCAAATCTAACATTTCCACTTTTCATGCTTTTGCCTTTGCTGCCATCACTGCCTATGAAGATGTAGAAAATCAAGACAACGAAGCAAGTGCTCTACTAGCGTGGAAATCCAGCCTTAACAACCAAAGTCAAGGTTCTCTGTCATCTTGGACCACTAGCACTAGTCTTTGCGAGTGGGAAGGAATCTCTTGTGATGAATCCAATTCTGTGACCACCATAAATGTTGCAAATTTTGGACTAAAAGGTACTCTTCTCAGTTTTAACTTTTCATCCTTCCCTAGGCTACTTTCTCTGGATGTTAGTAACAACAGTCTTAATGGAACTATTCCTCAGCAAATTGCTAACTTGTCAAGAATTTCTCAATTGAAAATGGATGGCAATAAACTTTCTGGATTCATTCCTGAGGAGATTGGAGAGTTGATGAACTTGAAGCATCTTTTCCTTGGATCAAATCAACTTTCTGGTACCATTCCCCCAACAATTGGAATGTTGAAGAATCTTGTTGAACTTGATTTGTCAGTTAACTCTATCTCTGGAACAATTCCTTCATTTAGAAACTTCACAAATTTAGAACAACTTCAGCTCTCAAACAACAGTCTCTCGGGCCCCATTCCTGAGGAATTGGGAAAACTCTATACTCTAACAACGATCAGGTTGTCATACAATAACTTGTCTGGGAGAATCCCAGCCTCCATTGGAGACCTAGTTAATTTGGTTATGTTTGAAATTGAACATAATGCCATTTTTGGATCAATTCCTTATGGCATTGGAAACTTGACCAAGTTGGTCAATATGTCAATTGCCTATAACATGATTTCTGGATCAATTCCCATCTCCATGGGAAACTTGGTCAATCTACACGCACTTCATCTTTCAGTGAACAACATTTCAGGAGTTATTCCTCCCACCTTTGCAAATTTGACAAAGCTAGTCTACTTTTTAGTGTTTGAGAACAAGCTTCATGGTAGATTACCCCCAGCACTAGATAACTTCACCTATATCCAAAACTTTCAACTATCTACTAATAGTTTCACTGGCCCTTTGCCACAACATATTTGCCTTGGTGGGTCACTTAGGAAATTTGCTGTTAACCATAATTATTTCACTGGCCCAGTTCCCAGAAGCTTGAAGAATTGTTCCAGCCTTAGTAGACTCAACCTTGCAGGGAACCAGTTGACAGGAAATATAACTGATGACTTTGGTATATATCCAAATTTGTATTTTGTTGAGCTGAGTAGCAATAATTTTTATGGCCACATTTCACCAAATTGGGCAAAATGTCCTAGTCTAATTAGCCTTAGGATGTCCAACAATAATTTATCTGGTGGTATACCTCTAGAACTTGGCCAGGCACCCAAGTTACAGACACTTGCACTGTCTTCAAATAATTTAACAGGGAAAATCCCAAAAGAAATTGGTAACTTGACCTCATTATTTTATTTGTTAATAAGCAACAATAAGCTTTCTGGCAATATTCCCATGGAAATAGGATCTTTGAAGGATCTTACAAATTTGGAGATGGCAGCAAATAATTTAAGTGGACCAATTCCAAAACAAATTGGAGGGTTGCTCAATTTAAATTTTTTGAACTTGAGTATGAATAAATTCACAGAAAGCATTCCTTCTGAGTTTAACCAATTGCAATATCTTCAAGATCTTGATCTTAGTTGGAATTTGTTAAATGGACAAATACCAGTAACACTGGGAGATTTGCAAAGATTAGAAAAGCTTAACCTCTCGCACAATAATCTCTCGGGGACCATTCCATCTAGTTTTAAGGACATGCTGAGCTTGACAAACGTTAACATATCTAGCAACCAATTGGAGGGTTCAATTCCTAAAAATATAGCCTTTCTTAAAGCTCCATTTGATGCATTAAAAAATAATAAAGGGTTGTGTGGTAATGCTTCTGGCTTGGTGCTTTGCCAAGAGTTGAGTCACAACCGTCATGGTAAAAAGAAAAGTAGAGTCATCATATTGGCGTTGTCCATTACTTTGGGTGTTCTATTGCTAGGAGTATTCGTGGTTGGGTTTTCATTATGTATTCATTGTCAAAGAGCAAGAAAAACTAAAGAGGATGCTAAAGAACAAAGTAAGGATCATTTCTCCATATGGAGTTATGATGGAAAATTAGTGTATGAAAGCATCATTGAAGCCACAGAGGGATTTGATGACGAATATCTCATTGGAGAAGGAGGGTCTGCTTCTGTTTACAAGGCAAAATTACCCACAGGACAGATTGTTGCTGTGAAGAAACTAGATGTTGCACTCAATGGAGAAACACTCAATTCTAAAGCTTTTACAAGTGAAGTTCGAGCCTTGACAGAAATCAAACACCGTAACATTGTAAAGTTATATGGATTTTGTTCACATTCACAATTCTCCTTATTGGTTTATGAGCTCCTAGAAGGGGGAAGCTTGGATAAAGTACTAAACAATGATACACATGCAACTTTGTTTGATTGGAATAGGAGAGTGAATGTTGTTAAAGGTGTTGCAAATGCTTTGTACCATATGCATCATGGTTGCTCTCCCCCTATAATTCATCGAGACATATCAAGCAAGAATGTCCTTATAGATTTGGAATATGAAGCTCGCATCTCAGACTTTGGATCAGCTAAGATTTTGAATCCTGATTCACACAATTTAACCTCATTTGCTGGTACTTACGGGTATGCTGCACCAGAGCTTGCTTACACTATGGAAGTGAATGAGAAGTGTGATGTGTTTAGTTTTGGTGTGCTTTGTTTGGAGATAATAATGGGAAATCATCCTGGAGATCTCATTTCTTCATTGTTCTCATCCACTACAATCACAATAGCATCTAACTTGCTGTTGAAGGATGTGTTGGACCAACGACTACCTCATCCAGTGAAGCCAGTTGTTGAAGAAGTGATTTTGATCGCAAAACTTGCATTTGCTTGCTTAAGTGAAAGTCCACGTGTTCGCCCAACCATGGAACAAGTGTATAATGAGTTTGTGATGCCAAAGTCACCTTCAGTGGATCCATTTCCCATGATCACTCTTGGTCAACTCCTAAATAATTGA 3120 0.3808 MGFTKLLLYLIVTTLLSSLSRFQSSKSNISTFHAFAFAAITAYEDVENQDNEASALLAWKSSLNNQSQGSLSSWTTSTSLCEWEGISCDESNSVTTINVANFGLKGTLLSFNFSSFPRLLSLDVSNNSLNGTIPQQIANLSRISQLKMDGNKLSGFIPEEIGELMNLKHLFLGSNQLSGTIPPTIGMLKNLVELDLSVNSISGTIPSFRNFTNLEQLQLSNNSLSGPIPEELGKLYTLTTIRLSYNNLSGRIPASIGDLVNLVMFEIEHNAIFGSIPYGIGNLTKLVNMSIAYNMISGSIPISMGNLVNLHALHLSVNNISGVIPPTFANLTKLVYFLVFENKLHGRLPPALDNFTYIQNFQLSTNSFTGPLPQHICLGGSLRKFAVNHNYFTGPVPRSLKNCSSLSRLNLAGNQLTGNITDDFGIYPNLYFVELSSNNFYGHISPNWAKCPSLISLRMSNNNLSGGIPLELGQAPKLQTLALSSNNLTGKIPKEIGNLTSLFYLLISNNKLSGNIPMEIGSLKDLTNLEMAANNLSGPIPKQIGGLLNLNFLNLSMNKFTESIPSEFNQLQYLQDLDLSWNLLNGQIPVTLGDLQRLEKLNLSHNNLSGTIPSSFKDMLSLTNVNISSNQLEGSIPKNIAFLKAPFDALKNNKGLCGNASGLVLCQELSHNRHGKKKSRVIILALSITLGVLLLGVFVVGFSLCIHCQRARKTKEDAKEQSKDHFSIWSYDGKLVYESIIEATEGFDDEYLIGEGGSASVYKAKLPTGQIVAVKKLDVALNGETLNSKAFTSEVRALTEIKHRNIVKLYGFCSHSQFSLLVYELLEGGSLDKVLNNDTHATLFDWNRRVNVVKGVANALYHMHHGCSPPIIHRDISSKNVLIDLEYEARISDFGSAKILNPDSHNLTSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLEIIMGNHPGDLISSLFSSTTITIASNLLLKDVLDQRLPHPVKPVVEEVILIAKLAFACLSESPRVRPTMEQVYNEFVMPKSPSVDPFPMITLGQLLNN* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1520 1039 Pfam Protein kinase domain 750 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1520 1039 Gene3D Ribonuclease Inhibitor 260 335 IPR032675 -
Apr9g1520 1039 Gene3D Ribonuclease Inhibitor 208 259 IPR032675 -
Apr9g1520 1039 SUPERFAMILY RNI-like 341 642 - -
Apr9g1520 1039 Pfam Leucine Rich Repeat 597 617 IPR001611 GO:0005515
Apr9g1520 1039 SUPERFAMILY Protein kinase-like (PK-like) 729 1016 IPR011009 -
Apr9g1520 1039 ProSitePatterns Protein kinases ATP-binding region signature. 753 776 IPR017441 GO:0005524
Apr9g1520 1039 PRINTS Leucine-rich repeat signature 119 132 - -
Apr9g1520 1039 PRINTS Leucine-rich repeat signature 595 608 - -
Apr9g1520 1039 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 1037 - -
Apr9g1520 1039 Pfam Leucine rich repeat N-terminal domain 50 89 IPR013210 -
Apr9g1520 1039 ProSitePatterns Tyrosine protein kinases specific active-site signature. 871 883 IPR008266 GO:0004672|GO:0006468
Apr9g1520 1039 Gene3D Phosphorylase Kinase; domain 1 707 825 - -
Apr9g1520 1039 Gene3D Transferase(Phosphotransferase) domain 1 826 1023 - -
Apr9g1520 1039 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 1037 - -
Apr9g1520 1039 Gene3D Ribonuclease Inhibitor 48 207 IPR032675 -
Apr9g1520 1039 Gene3D Ribonuclease Inhibitor 341 665 IPR032675 -
Apr9g1520 1039 SMART LRR_typ_2 307 330 IPR003591 -
Apr9g1520 1039 SMART LRR_typ_2 164 188 IPR003591 -
Apr9g1520 1039 SMART LRR_typ_2 116 140 IPR003591 -
Apr9g1520 1039 SMART LRR_typ_2 547 571 IPR003591 -
Apr9g1520 1039 SMART LRR_typ_2 595 618 IPR003591 -
Apr9g1520 1039 SMART LRR_typ_2 211 235 IPR003591 -
Apr9g1520 1039 SMART LRR_typ_2 476 499 IPR003591 -
Apr9g1520 1039 ProSiteProfiles Protein kinase domain profile. 747 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1520 1039 SUPERFAMILY L domain-like 70 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1520 Apr-Chr9 24730800 24734510 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1520 52 919 Receptor kinase-like Gene Family AT4G08850 43.854 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr9g1520 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1520 - - gmx:100797314 1310.43