LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g1516	ATGTCGGGCAAACGAAAAGACGCCCTTTCGAAGCTAATTGGAGCAAGATTCTTCAGCAAAAACTACGAGGCAGAAAATGGGAAACTTGAGGCATTGTTTCGGTCTGCACGTGACTTTGAAGGGCATGGTACCCACACGCTGTCAACAGCTGGTGGAAATTTTGCTTTTGGTGCAAATGTGTTTGGTAATGGGAATGGCACTGCAAAGGGTGGATCCCCAAGAGCAAGAGTCGCAGCCTACAAAACGTGTTGGTCTAAAAATGATGTGCCTCAATGCCATGATGCAGACATAATACAAGCATTTGATCATGCCATACACGACGCTGTTGATGTTATCTCTATCTCTGCGGGTAAGTATCCCTCTGCTGAAGCCTTATTCACTGATGGGATTTCCATAGGGGCATTCCATGCTGTTGCCAGAAACATACTCGTTGTTTGCTCTGCTGACAATGACGGTCCAACACCTTCGAGTGTCGCAAATGTTGCACCCTGGTCCTTCACTGTGGCTGCTGGTACAATCGACAGAGATTTTCTCAGCAACATTTCCGTTGGTAACAAACATTACCTTCAGGGAGCCAGTCTAAATAGAGGCTTGCCATCAGGGAATTTTTATCCGTTGATTCACGCAATCGATGCTAGACTCCCTAATGCCACAATTCAAGATGCTCGTCTTTGCAAGGCTAGAACACTTGATCCTAAAAAAGTAAGGGGAAAAATAGTAATATGCGTTCGACGTGAGAAAATAACATCAATTGCTGAGGGCCAAGAAGCTGCTCTTGCCGGCGCAGTGGGAGTGGCTGTGGTGAATGATGAGAAAAGTGGAAAAACGCTCTTGGCTGAGCCTCATCCTTTAACTGCTGTAAACGTGGATCCGAGAGCTGCTAGTCAAGCGTTCAATTATCAAAGTTCCAATAAAAACAATAGCAGGGAACTTGCAGCTCACGTTACATCAGCACAAACATATTTAGGAGTAAAGCCAGCTCCAATAATGGCTGGATTCTCATCCAGGGGTCCAAGTGCGGTGCAACCATTGATACTCAAGCCTGATATAACTGGTCCTGGTGTGAACATACTAGCGGGGTATTCACCAGCTACAGGGCCCTCTAACATAGCATCAGATAAGAGGCGTGTTCTTTTCAATATACAACAGGGAACATCTATGTCCTGCCCTCACGTTGCTGGAGTTGCCGCTCTTCTTAAAACACTTCATCCTAATTGGACCCCTGCAGCTATCAAATCAGCCATTATGACTACTGCAACAACATTAGATAACACAAACCGACCAATTCGGGACACATTTGATAAAGTGGCAACTCCATTTGAATATGGGTCTGGACATATTCGACCTAACCATGCAATGGACCCTGGTCTTGTTTATGATCTAAGCACCAGCGATTACTTGATTGTGCTTCTGTCTTTCAACATTGAAAATCTTAATTATCCATCAATCACAGTAGCTTATGGTGGAATACACACTATAAAGGTTACTCGTACACTTACAAATGTTGGGCCTCCTAGCACTTATGTTGTGAGCACTCACAAACTAGAAGGATTTAAGGTCCTCGTTCGACCAAGTTCGTTGACTTTTAAGAGAATTGCAGAAAAGAAGAAATTTAGTGTTATTCTGAAGGCAAGGGGTGTACCTCGTCATGGTTTTCCAATATTTGGGAACTAG	1674	0.4427	MSGKRKDALSKLIGARFFSKNYEAENGKLEALFRSARDFEGHGTHTLSTAGGNFAFGANVFGNGNGTAKGGSPRARVAAYKTCWSKNDVPQCHDADIIQAFDHAIHDAVDVISISAGKYPSAEALFTDGISIGAFHAVARNILVVCSADNDGPTPSSVANVAPWSFTVAAGTIDRDFLSNISVGNKHYLQGASLNRGLPSGNFYPLIHAIDARLPNATIQDARLCKARTLDPKKVRGKIVICVRREKITSIAEGQEAALAGAVGVAVVNDEKSGKTLLAEPHPLTAVNVDPRAASQAFNYQSSNKNNSRELAAHVTSAQTYLGVKPAPIMAGFSSRGPSAVQPLILKPDITGPGVNILAGYSPATGPSNIASDKRRVLFNIQQGTSMSCPHVAGVAALLKTLHPNWTPAAIKSAIMTTATTLDNTNRPIRDTFDKVATPFEYGSGHIRPNHAMDPGLVYDLSTSDYLIVLLSFNIENLNYPSITVAYGGIHTIKVTRTLTNVGPPSTYVVSTHKLEGFKVLVRPSSLTFKRIAEKKKFSVILKARGVPRHGFPIFGN*	558

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g1516	557	Gene3D	-	174	322	-	-
	Apr9g1516	557	PRINTS	Subtilisin serine protease family (S8) signature	38	51	IPR015500	-
	Apr9g1516	557	PRINTS	Subtilisin serine protease family (S8) signature	383	399	IPR015500	-
	Apr9g1516	557	Pfam	Subtilase family	30	425	IPR000209	GO:0006508\|GO:0008236
	Apr9g1516	557	SUPERFAMILY	Subtilisin-like	12	457	IPR036852	GO:0004252\|GO:0006508
	Apr9g1516	557	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	453	-	-
	Apr9g1516	557	ProSitePatterns	Serine proteases, subtilase family, serine active site.	384	394	IPR023828	-
	Apr9g1516	557	Pfam	PA domain	225	276	IPR003137	-
	Apr9g1516	557	Gene3D	-	474	556	-	-
	Apr9g1516	557	PANTHER	SUBTILISIN-LIKE SERINE PROTEASE	11	470	-	-
	Apr9g1516	557	PANTHER	SUBTILISIN-LIKE SERINE PROTEASE	471	556	-	-
	Apr9g1516	557	Gene3D	Peptidase S8/S53 domain	10	466	IPR036852	GO:0004252\|GO:0006508
	Apr9g1516	557	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	11	470	IPR045051	-
	Apr9g1516	557	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	471	556	IPR045051	-
	Apr9g1516	557	CDD	PA_subtilisin_like	180	306	-	-
	Apr9g1516	557	Pfam	Fibronectin type-III domain	477	546	IPR041469	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g1516	Apr-Chr9	24692313	24696261	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g1516	11	556	Subtilisin-like Serine Gene Family	AT2G04160	48.246	0.0	532

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g1516	-		-	aprc:113874513	1075.85