Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1513 ATGTCACGTGGAGAATCTTCCTCAAACTCTTGTAATGCACCATGGCGATGGACATACCATATTTTCTTGAGTTTTAGAGGAGCAGACACACGTTTAGATTTCATAGATCATTTATATGCTGCGTTGGTGAGAAAGGGAATCATAACTTTTAGAGACGATAAGCAGCTTGAGAAAGGTGATGTGATTTCTCAAGAACTCCTTAGAGCAATCGAGGAGTCACTCGGTGCCATTGTTATTCTCTCCAAGAACTATGCTTCTTCTTCTTGGTGTTTGGATGAGCTCCAAACAATTATTGAATCAAAAAGAGTGTTGAACAGCGAGGTTTTTCCAGTCTTCTATGATGTCACTCCCTATGACGTTATGCACCAGACAAGGAGTTTTGCTGAGGCTTTCAAGAAACATGAAATAAGATACGAGAAAGACAAGGGAAAGGTGCAAAAATGGAGAGATGCCTTGAAGGAAGTTGCCAACATTTCTGAGAGGAAATTCAAGAATCGGAATCAAACAGAGCTCATTGAAAATATTGTTGAATCGGTATGGACAAAACTACGTCCTAAAATGCCATCTTTCAATGATGGGCTAGTTGGCATTGACTCAAGAGTTAGAAAATTGGATTCACTTTTAAGGACAAAATTGGAGGATGTTCTCTTTATCGGAATATGGGGGATTGGTGGCATTGGAAAGACAACATTAGCAAGAGTTGTCTTTAAGAAAATCCAGAGTCAATTTGAGATTAGTTGCTTTCTTGACAATGTCAGAGAGATTTCTGGAGAAACAGATGGTATGCTTCGCTTACAAAGAAAAATTCTTTCTCATTTGGAAATAAAAGGCTTAGAAATTAAAGATTTGGACGAAGGTAAAAACACAATCAGAAACCTTTTATTCAAAAGGAAAGTTCTCCTTGTGGTTGATGATGCTAATGACATAAGCCAACTAGAGAATTTAGCTGAGAGGCATAAGTGGTTTGGCCCTGGGAGCAGAGTTATAGTAACAACAAGAGAAAAAGATGTATTAATATCACATGGAATAGTTGAAAGTTATGAAATTGACTTCTTAAATTCAGAAGAATCCCTTCAACTCTTGAGTCAGAAAGCCTTCAAAAGAGATCAACCTCGAGAGCATTATTTGGAGTTGTCAAAAGCTGTTGTTAACTATGCTGGAGGCCTTCCTTTGGCCTTGAATTTGTTGGGTTCATTTCTTTGTGGAAGAAGTGAATCCCAATGGAAAGAAGTTGTGGGTATGATAAATGAAGTCCCAGCCAATCACATTGTGATGAAATCACTTAGAATAAGCTACAATGGGTTGCCAATACGTTACAAGGCTTTATTTCTTGATATGGCATGTTTCTTCAAAGACTGGGTAAAAGAGCTTGCGACACAAGCGCTAGAAATTTGTGACCGGTATCCACCAATTGGAATTGAACTTCTAATCGAAAAGGCATTGCTAAATCATGATGGATTTCGTTTGGGGATGCATGATTTGCTTCAAGAAATGGGAAGGGAAATCGTTTTAGAAGAATGTCACATAGATGCCAGCAAACGTAGTAGACTGTGGTCTCTAGAAGACATTAATCATGTATTAAAATACAATAAGGCAAATGAATCGATTGAAGGTGTAGTATTGAACTCACACAAGAGTCCGTACGAAGCAATTTGGGATCCCGAAGCATTCTCAAGGATTTATAATCTTAAATTACTTATCATAAATTTTCATATACGACTTCCTCGTGGCCTAAAATGTCTTAGCAGGTCATTGAAATATCTTCTGTGGACGGAGTATTCTTTGGAAGCTCTGCCCCTTGGATTGCAGCTAGATGAACTTGTAGAGTTGAAATTGTATAACAGCAAAATAAGAAAGATTTGGAATGAAAATCAATTTTTTGCAAAGCTGAAGTTCATTGATCTAAGCTTTTCTAAAGATCTTATTCACTCTCCAATAGTTTCTGGGGCTCCATGTCTTGAAAGATTGCTTCTTATAGGCTGTATAAACCTTATTGAGGTTCATCAATCTGTTGGACAGCACAAGAAGCTTGTTGTGTTGTACTTGAAAGGCTGCATAAATCTTCAAACCTTTCCAAGAAGATTTGAAATGGATTCTTTGGAGGAATTAAGTCTTTCAGGGTGCTCAAAGGTCAAAAAGCTCCCAGAGTTTGGAAAGAACATGAAATGCTTATCGCTGCTTAATTTGGAGAATTGCAAAAATCTTCTTTGCCTACCAAATTCCATTTGCAATCTGAAATCTCTTAGAAAACTCTATATATCTGGCTGTTCAAAATTTTCTAGGCTTCCTGATGGAATGAATGAAAATGAGTCTTTGGAGGAGCTTGATGTGAGTGGCACAGCTGTAAGACAAATCACTTTATCCAAAGTTCGTTTAGAAAATCTTAAAGAGCTCTCCTTTGGTGGAAGGAAAGTAGCACCCAACTCAGGGAATTTACTTCTATGGATCACAAAGTTTAAGAGGCAACAAGAAACAACGGAGTTGATATTGCCACCTCTCTCCAGATTTTTTGCCTTAACATTCTTGGATTTAAGTTACTGCAACCTTACTGATAACTCAATTGTTCATGATCTTGGTTCTTTACCATTGTTGCAAGGCTTAGATTTAAGTGGGAACTATTTTGTTAACCCACCTGCTCAGTGCATTACTAATCTTTCTATGTTGGAGACTTTGTCCTTCACTAATTGCCTTAGACTTGAGTCGTTGCCTATGCTTCCACCAAATATACAAGCCTTATTTACAAATAATTGCCCTAAAATGAAACCCTTAAATTTGGATGAACAAATGCTATGGAAGATATTTGAGTCGCATTCAAATATGGATCCGATTGAAGGTCCAGATCCTTGGTTCGTCATACCAGGGAATGAAATTCCATCATGGTTTAACAATCAAGAGTGGTTTTCAATTGATTCGTTTACATCAATTACAGTGGATGTACCAAATCACTATCAGGCAAGTGAATGGTGGGGCATTGCGGTATGCCTAGCATTAGAACCTTTAAATGTGGTGTCATCTCCATCTTATGTGACGCCAATTTCCACACATAATAAGGAAATGTGCATTTATTATTGGGTCTGCAAAGCTCCTGATAGAGAACCTGATCCTAAATTTCCTATAGCATCCAAATATGGGCATTTGGTTTATGAATTCAATGATCCTTACATCCATATTATATTCTTGAGTGGTGATCATGTATATATTCAACATTATCTAAGTGGCGAGCAAAACAACCTTCAATTGATATTTTACGTGGAAAATCTTTCTGAATCATGCAAGGCTACAATAAAGAAATGTGGGTGTCGTGTGATATGTAAGGAAGATATTGAAAATTGGCACAACCACTCATATGATCTTCACATATCAAGATTAACAGAAACGGAAGACGATGAGAGATGCAGTCATGTGCTGGAGCTGGAAGAACCTTCTTCAAATACACATCTTCTTCAAAGGACAGAACTACAGTGA 3465 0.3755 MSRGESSSNSCNAPWRWTYHIFLSFRGADTRLDFIDHLYAALVRKGIITFRDDKQLEKGDVISQELLRAIEESLGAIVILSKNYASSSWCLDELQTIIESKRVLNSEVFPVFYDVTPYDVMHQTRSFAEAFKKHEIRYEKDKGKVQKWRDALKEVANISERKFKNRNQTELIENIVESVWTKLRPKMPSFNDGLVGIDSRVRKLDSLLRTKLEDVLFIGIWGIGGIGKTTLARVVFKKIQSQFEISCFLDNVREISGETDGMLRLQRKILSHLEIKGLEIKDLDEGKNTIRNLLFKRKVLLVVDDANDISQLENLAERHKWFGPGSRVIVTTREKDVLISHGIVESYEIDFLNSEESLQLLSQKAFKRDQPREHYLELSKAVVNYAGGLPLALNLLGSFLCGRSESQWKEVVGMINEVPANHIVMKSLRISYNGLPIRYKALFLDMACFFKDWVKELATQALEICDRYPPIGIELLIEKALLNHDGFRLGMHDLLQEMGREIVLEECHIDASKRSRLWSLEDINHVLKYNKANESIEGVVLNSHKSPYEAIWDPEAFSRIYNLKLLIINFHIRLPRGLKCLSRSLKYLLWTEYSLEALPLGLQLDELVELKLYNSKIRKIWNENQFFAKLKFIDLSFSKDLIHSPIVSGAPCLERLLLIGCINLIEVHQSVGQHKKLVVLYLKGCINLQTFPRRFEMDSLEELSLSGCSKVKKLPEFGKNMKCLSLLNLENCKNLLCLPNSICNLKSLRKLYISGCSKFSRLPDGMNENESLEELDVSGTAVRQITLSKVRLENLKELSFGGRKVAPNSGNLLLWITKFKRQQETTELILPPLSRFFALTFLDLSYCNLTDNSIVHDLGSLPLLQGLDLSGNYFVNPPAQCITNLSMLETLSFTNCLRLESLPMLPPNIQALFTNNCPKMKPLNLDEQMLWKIFESHSNMDPIEGPDPWFVIPGNEIPSWFNNQEWFSIDSFTSITVDVPNHYQASEWWGIAVCLALEPLNVVSSPSYVTPISTHNKEMCIYYWVCKAPDREPDPKFPIASKYGHLVYEFNDPYIHIIFLSGDHVYIQHYLSGEQNNLQLIFYVENLSESCKATIKKCGCRVICKEDIENWHNHSYDLHISRLTETEDDERCSHVLELEEPSSNTHLLQRTELQ* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1513 1154 Gene3D Ribonuclease Inhibitor 817 943 IPR032675 -
Apr9g1513 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Apr9g1513 1154 PRINTS Disease resistance protein signature 217 232 - -
Apr9g1513 1154 PRINTS Disease resistance protein signature 293 307 - -
Apr9g1513 1154 PRINTS Disease resistance protein signature 386 400 - -
Apr9g1513 1154 PRINTS Disease resistance protein signature 719 735 - -
Apr9g1513 1154 Pfam C-JID domain 952 1109 IPR045344 -
Apr9g1513 1154 Gene3D - 351 436 IPR042197 -
Apr9g1513 1154 Gene3D Ribonuclease Inhibitor 697 771 IPR032675 -
Apr9g1513 1154 Gene3D Ribonuclease Inhibitor 539 696 IPR032675 -
Apr9g1513 1154 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Apr9g1513 1154 Pfam TIR domain 19 192 IPR000157 GO:0007165
Apr9g1513 1154 Pfam NB-ARC domain 205 428 IPR002182 GO:0043531
Apr9g1513 1154 SUPERFAMILY L domain-like 491 934 - -
Apr9g1513 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 159 IPR035897 -
Apr9g1513 1154 Gene3D - 185 344 IPR027417 -
Apr9g1513 1154 SMART till_3 18 158 IPR000157 GO:0007165
Apr9g1513 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 722 969 IPR044974 GO:0006952
Apr9g1513 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 725 IPR044974 GO:0006952
Apr9g1513 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 722 969 - -
Apr9g1513 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 725 - -
Apr9g1513 1154 Gene3D - 14 184 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1513 Apr-Chr9 24675864 24680679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1513 19 800 WRKY Transcription Factor Family AT4G12020 31.425 6.90e-93 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1513 - - gmx:100799850 1665.97