Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1512 ATGTTATGTGGAGAATCTTCCTCAAATTCCTATTCCAATGCACCATTGCGATGGAAGTACCATGTTTTCTTGAGTTTTAGAGGAGAAGGTACACATCTTGATTTTACTCACAACTTGCAGGCTTCGTTGCAGCGAAAGGGAATCATAACTTTCAGATATGACAAAGACAAACAACTTGAGAAAGGAGATGTGATTTTGGAAAAACTCCATAAAACAATTGAAGAGTCCCTTGTTGCCATTGTGCTTCTCTCCGAGAACTATGCTTCTTCCACTTGGTGTTTGGAGGAACTACAAAAGATTCTTGAATCAAAGAGGGTGTTGGGGACAGAAATTCTTCCTGTCTTCTATGATGTAAATCCTTCTGATGTTAGATACCAGAAAAATAGTTTCGCTAAGGCTTTGGAAGAACATGCGATTGAATGTGAGGAGGACAAAGAGAAAGTGCAAAAATGGAGGGAATCCTTGAAAGAAGTTGCTGGTTTTTCTGGCTGGGAGTCTAAGAATATGTCTTACTTATGGAAAAAAGAAGAGCTCATTGACGATATTATTGAATCGGTATGGACAAAGCTACGTTCTAAAATGCCATCTTACGATGACGGGCTAGTTGGAATTGATTCAAGAGTTGAAAAAATGGATTCACTTTTAAGAATAGAATTGAAAGACGAGGTTCGTATTATAGGAATATGGGGCATGGGTGGCATTGGAAAGACAACTCTAGCAAGAACTGTATTTAAGAAAATATGTGACCAATTTGATATTAGTTGCTTCCTTGAAAATGTTGGTGAAATTTCCAAGGAGAGTGAGGGTATGCTTAGCTTACAAAGAGCACTTCTTTCTCACATTAAAATAGAAAGCTTGAAAATCGAAAATTTGGATGAAGGAAAGAGCACAATACACCAGCTCTTGCACAACAAGAAAGTTCTCCTAGTCCTTGATGATGTTGACAACATAAGACAACTAGAGAATCTGGCTAATGAACAGAAGTGGTTTGGCCCTGGGAGTAGAATTGTAATAACAACAAGAGACATGGAAGTACTAAGATCATATGGAACAACTAAAAGTTATAAAATTGAACTATTAAATTCTGATGAATCCCTTCAACTCTTCTACAAGAAAGCATTTAAAGTAGATGAACCACAAGAGCATCGATTGCAGTTGTCAAAAGTTGCTGTCCAACAAGCTGGTGGCCTTCCTTTGGCCCTTGAGATGTTGGGGTCATCCTTGTGTGGGAGAAATGAATCTCAATGGAAAGAATTCTTGGATATGAAAGAATATTCAAAGAAAGATGTTGTGATGAAGAACCTTAAAATAAGTTATGATGGGTTGCCACCAAGTTATCAGAATTTATTTCTTGATATGGCATGTTTCTTCAAAGGGTGGGTAAAAGAGCATGTGAGACAAATTCTAACAATTTGTGGCCGTAATCCATCAGTTGGAATTGAAGTTCTAATTGATAAATCACTATTAACTTATGATGGATTACGTTTGGAGATGCATGATTTGCTTCAAGAAATGGGAAGAAAAATTGTTGTTGAAAAACAAGAAAGTCTAATAGATGCTAGCAAGCGCAGTAGATTGTGGTCACCTGAAGACGTTGATCAAGTACTGAAAAGAAATAAGGAAAATGAATTGATTGAAGGTATAGTTTTGAAGCCATCCACTCAGCCATATGAAGCAAACTGGGATCCCACAGCCTTCTCCAAGATGCATAATCTTAAATTCCTTATCATTAATTGTCATAATATACAACTTCCACGTGGCCTCAAATGTCTTTGCAGTTCATTGAAATTTCTTCAGTGGACGAAGTATCCTTTGGAAGCTTTTCCGCTTGGTGTGCAGCTAGATGAACTTGTAGAGTTGAGAATGCTTTGCAGCAAAATAAAAAAGATCTGGGGTGAAAATCAATTTTTTGCAATGTTGAAGCTCATTGATTTGAGCCATTCCGAATATCTAATTCAAACTCCTATCGTTTCTGGGGTTCCATGTCTTGAAATTTTGCTTCTTGAAGATTGCATAAACCTTTTTGAGGTTCACCAATCTGTTGGACAGCACAAGAAGCTTGTTCTATTGAACTTGAAAGAATGCATAAATCTTCAAAACCTTCCAAGAAAATTTGAAATGGACTCTTTGGAGGAGTTGATTCTTTGTGGATGCTCAAAAGTTAAAAAGCTCCCAGACTTTGGAAAGGATATGAAATGTTTATCATTGCTTAATTTGGAGAGTTGCAAAAATCTTATTTGCCTACCAAATTCTATTTGCAATCTGAAATCTCTTAGAAAACTCAGTATTTGTGGTTGCTCAAAATTTTCTACTCTTCCCAGCAATATGAATGAAAATGAGTCTTTGGAGGAACTTGATGTCCGTGGCACTGCTATAAGAGAAATTACTTCATCCAAAGTTTGTCTCGAAAATCTCAAGGAGCTCTTATTTGGTGGAAGGAAAGATCTGCCATCCAATTCATCACGGAACTTGTGTCAACGGATCTTGAATTTTTGGAAGCAAACAGTTTTGAAGCAGTTGATCTTGCCTCCACTTTCTCATTTTTCCAGCTTGAAGTTCTTGGATTTAAGTTATTGTAACCTTAATGATGAATCAATTCCAGATGATCTTGGATCCTTATCATCTTTGTTGGGCTTAGATCTAAGTGGGAACAATTTTGTTAGTCCACCTGCTCATTGCATTAGTAATCTTTCTATGCTGCAAAGTTTGACCTTAACTGATTGCCCAATGCTTGAGTCTTTGCCTATGCTTCCACCAAATGTTCAATGCTTATGCACGGCTAATAGTACCCAAATGAAACCCTTGAATTCAGATGCATATATGCTATGGAAGATCTTTGAGTCACATACCAATCATGTATATTTTTTATACACACCTCATTCTCTCTATCCTAAGCCCCCTACTACACCCCCTAATTATTTCCATAAAGTTTTGGTTTCCCAAATGGAAGATAGGCCACATATTTGGTTCATCATTCCAGGGAAAGAAATTCCAAAATGGAATGAACAACATTTTCCAATTGATCCATCACATCACCCATATAACAAGTTGGGTTCTGATTCAGTTGCATCAATGGTAGTGGATGTACCTAACTCTTGTCGTTATAGTGAATGGTGGGGAATTATAATATGCATAGCATTAGAATCTTTAAATCTGCAGCTATCTTCTCCATCACATGTGAGGCCATCTTCCATGGGCAACGAGGAAACATGCATTTATTATTGGATCTGTAAAGCTCCTGATGGTGAACCTGTTGACTTGTGTATCCCCCCAGAACCAAAATTTGGCCACCTAGTTTCTGAATGCTGTGAAGAGAAATGCCAACTTCAACTGACATTTTATGTGGAGAATCTTTCTAAGACGTGGAAGCCAACAATAAGGAAGTATGGCTGTCGTGTTATATTTAAGGAAGATGCTGAAGATTGGTGCAAGTTTTCAAGACTAACATAA 3450 0.3736 MLCGESSSNSYSNAPLRWKYHVFLSFRGEGTHLDFTHNLQASLQRKGIITFRYDKDKQLEKGDVILEKLHKTIEESLVAIVLLSENYASSTWCLEELQKILESKRVLGTEILPVFYDVNPSDVRYQKNSFAKALEEHAIECEEDKEKVQKWRESLKEVAGFSGWESKNMSYLWKKEELIDDIIESVWTKLRSKMPSYDDGLVGIDSRVEKMDSLLRIELKDEVRIIGIWGMGGIGKTTLARTVFKKICDQFDISCFLENVGEISKESEGMLSLQRALLSHIKIESLKIENLDEGKSTIHQLLHNKKVLLVLDDVDNIRQLENLANEQKWFGPGSRIVITTRDMEVLRSYGTTKSYKIELLNSDESLQLFYKKAFKVDEPQEHRLQLSKVAVQQAGGLPLALEMLGSSLCGRNESQWKEFLDMKEYSKKDVVMKNLKISYDGLPPSYQNLFLDMACFFKGWVKEHVRQILTICGRNPSVGIEVLIDKSLLTYDGLRLEMHDLLQEMGRKIVVEKQESLIDASKRSRLWSPEDVDQVLKRNKENELIEGIVLKPSTQPYEANWDPTAFSKMHNLKFLIINCHNIQLPRGLKCLCSSLKFLQWTKYPLEAFPLGVQLDELVELRMLCSKIKKIWGENQFFAMLKLIDLSHSEYLIQTPIVSGVPCLEILLLEDCINLFEVHQSVGQHKKLVLLNLKECINLQNLPRKFEMDSLEELILCGCSKVKKLPDFGKDMKCLSLLNLESCKNLICLPNSICNLKSLRKLSICGCSKFSTLPSNMNENESLEELDVRGTAIREITSSKVCLENLKELLFGGRKDLPSNSSRNLCQRILNFWKQTVLKQLILPPLSHFSSLKFLDLSYCNLNDESIPDDLGSLSSLLGLDLSGNNFVSPPAHCISNLSMLQSLTLTDCPMLESLPMLPPNVQCLCTANSTQMKPLNSDAYMLWKIFESHTNHVYFLYTPHSLYPKPPTTPPNYFHKVLVSQMEDRPHIWFIIPGKEIPKWNEQHFPIDPSHHPYNKLGSDSVASMVVDVPNSCRYSEWWGIIICIALESLNLQLSSPSHVRPSSMGNEETCIYYWICKAPDGEPVDLCIPPEPKFGHLVSECCEEKCQLQLTFYVENLSKTWKPTIRKYGCRVIFKEDAEDWCKFSRLT* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1512 1149 Pfam TIR domain 19 200 IPR000157 GO:0007165
Apr9g1512 1149 Gene3D Ribonuclease Inhibitor 706 778 IPR032675 -
Apr9g1512 1149 Gene3D Ribonuclease Inhibitor 779 939 IPR032675 -
Apr9g1512 1149 Gene3D Ribonuclease Inhibitor 560 705 IPR032675 -
Apr9g1512 1149 Coils Coil 134 154 - -
Apr9g1512 1149 Gene3D - 189 355 IPR027417 -
Apr9g1512 1149 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 164 IPR035897 -
Apr9g1512 1149 PANTHER TMV RESISTANCE PROTEIN N-LIKE 734 937 - -
Apr9g1512 1149 PANTHER TMV RESISTANCE PROTEIN N-LIKE 28 723 - -
Apr9g1512 1149 Pfam NB-ARC domain 220 439 IPR002182 GO:0043531
Apr9g1512 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 452 IPR027417 -
Apr9g1512 1149 Gene3D - 16 188 IPR035897 -
Apr9g1512 1149 SMART till_3 19 161 IPR000157 GO:0007165
Apr9g1512 1149 ProSiteProfiles TIR domain profile. 18 194 IPR000157 GO:0007165
Apr9g1512 1149 Gene3D - 359 443 IPR042197 -
Apr9g1512 1149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 734 937 IPR044974 GO:0006952
Apr9g1512 1149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 723 IPR044974 GO:0006952
Apr9g1512 1149 PRINTS Disease resistance protein signature 225 240 - -
Apr9g1512 1149 PRINTS Disease resistance protein signature 301 315 - -
Apr9g1512 1149 PRINTS Disease resistance protein signature 394 408 - -
Apr9g1512 1149 PRINTS Disease resistance protein signature 846 862 - -
Apr9g1512 1149 SUPERFAMILY L domain-like 498 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1512 Apr-Chr9 24669180 24673476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1512 8 810 WRKY Transcription Factor Family AT4G12020 30.952 3.88e-89 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1512 - - gmx:100798387 1650.18