Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1505 ATGCAAGTGGCAGCAGAACTCCAACACACCCATCACCACAAGCGCCAAGACACCCAGATGTGCCGGAAAATCCAACTCAGTATCACCGATCACAACCTCTCTCACGCCGCCGCCGGCGACGGTGCCGGTGACAAGGTCGACGGCGAGGATCTCTATATTCCACCCCTCAATTTTGCTATGGTTGATAATGGCATTTTCCGCTCTGGCTTCCCTGAACCTGCTAACTTCTCCTTCCTTCAAACCCTTGGCCTCCGTTCCATTATATATTTGTGTCCTGAGCCATATCCAGAGGCCAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCACTTTGGGATTGAGGGTCACAAGGAACCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCTCTGAAAGTTGTCCTTGATGTCAGGAACCACCCAGTCATAATTCACTGTAAGCGAGGAAAGCATCGAACAGGATGTTTAGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCTGTCTTTGACGAGTACCAGCGCTTTGCGGCTGCGAAAACAAGAGTTTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCCAGCCTGAAGCATTTGCCCATATCATTTTCTTGTTTGAAGAGATTGGACTAA 651 0.4716 MQVAAELQHTHHHKRQDTQMCRKIQLSITDHNLSHAAAGDGAGDKVDGEDLYIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYHFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKTRVSDQRFVELFDISSLKHLPISFSCLKRLD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1505 216 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Apr9g1505 216 CDD PFA-DSP_Siw14 51 198 - -
Apr9g1505 216 Pfam Tyrosine phosphatase family 52 204 IPR004861 -
Apr9g1505 216 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 7 213 - -
Apr9g1505 216 PRINTS Plant and fungal dual specificity phosphatase signature 52 69 IPR020428 GO:0016791
Apr9g1505 216 PRINTS Plant and fungal dual specificity phosphatase signature 89 102 IPR020428 GO:0016791
Apr9g1505 216 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Apr9g1505 216 PRINTS Plant and fungal dual specificity phosphatase signature 125 139 IPR020428 GO:0016791
Apr9g1505 216 PANTHER TYROSINE-PROTEIN PHOSPHATASE 7 213 - -
Apr9g1505 216 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 199 IPR029021 -
Apr9g1505 216 Gene3D Protein tyrosine phosphatase superfamily 52 201 IPR029021 -
Apr9g1505 216 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 211 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1505 Apr-Chr9 24622034 24627132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1505 39 214 Protein tyrosine phosphatase (PTP) family AT4G03960 72.727 1.65e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1505 K18045 - gmx:100814279 378.637