Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1501 ATGCGCCGAGGGAGAGGAACCGCCGTCGTCGTCGCCGCCGCCGCCGCAGATCCAACCCCGGCGGCGGAGCGAGAATCTCCGGCGAAGGAGACGCGGTTCCGCGGTGTAAGAAAGCGGCCATGGGGACGATTCGCGGCGGAGATTAGAGATCCGTGGAAGAAAGCCCGCGTGTGGTTGGGAACCTTCGATTCAGCCGAGGACGCGGCCCGGGCTTATGACGCTGCAGCCCGATCCTTCCGCGGGCCCAAAGCGAAAACAAACTTTCCTTTCCCAAACCCTGAGATGGATCACTCTCATATTCCCCTTTACCAAGACCATGGGTTTTCTAAGTTCGACCCGGTCCAAGTGAACCGGCCCACGACCAGCGGCATGAGCAGCACCGTTGAGTCTTTCAGCGGGCCTAGGGTACCTTCTTCTTCCACTCTCCACCCACGTCGACCACTCAACCCTCTCCCCGTCGACGATTGCCACAGCGACTGCGACTCCTCCTCCTCCGTCGTCGACGACGAAGACTGCGTCCTCACCTCATCCTTCCGGAAACCCCTTCCCTTCGATCTCAACCTCCCTCCTCCCGCCGATGACGACGCCGACGACCTTCGCGCTACCACTTTGTGCCTCTGA 621 0.6151 MRRGRGTAVVVAAAAADPTPAAERESPAKETRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFPNPEMDHSHIPLYQDHGFSKFDPVQVNRPTTSGMSSTVESFSGPRVPSSSTLHPRRPLNPLPVDDCHSDCDSSSSVVDDEDCVLTSSFRKPLPFDLNLPPPADDDADDLRATTLCL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1501 206 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Apr9g1501 206 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Apr9g1501 206 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Apr9g1501 206 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Apr9g1501 206 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Apr9g1501 206 MobiDBLite consensus disorder prediction 111 150 - -
Apr9g1501 206 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Apr9g1501 206 MobiDBLite consensus disorder prediction 114 145 - -
Apr9g1501 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 27 184 - -
Apr9g1501 206 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Apr9g1501 206 MobiDBLite consensus disorder prediction 1 34 - -
Apr9g1501 206 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 184 - -
Apr9g1501 206 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1501 Apr-Chr9 24556874 24558174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1501 1 206 AP2-EREBP Transcription Factor Family AT1G50640 55.042 1.74e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr9g1501 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1501 K09286 - gmx:100795557 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1501 9 24556874 24558174 Apr9g1501 9 24556874 24558174 ECH