Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1496 ATGATTTCGCAGCTGAATCTAAATGGCTTCTTCATTTCCCACCCTTCAACGCTTCAAAAACCCCTTCCACCCCAAACCCCATCTTTTTTCTCTCTCAAAGTTCGATGCTTTCGCGTTTGCCATCCTACACCTGTTCCTTCTTTTTCTCCTCTCAGTTCTGTTCCCTCGTCACGTTCCGCCACACGTGTCTCTCGCCTCATGCGAACTCAAGTGCAGCATGTTCTAACCGATTACCTCCATTTAACTCGGGGCTACAGCTTCTTAGACGCCGAGTTCATCAGCAAAAACTCGCCACGTTTTGTTGAATCATTGTTGTCAAAAATTGATGTCAAAGATGATGTTGCTCGATCGTTGAGGAAGTTCCTAAGGTATAACCCCATTAACGAGTTTGAACCCTTTTTTGAGAGTTTGGGGATTAGCCTCTCTGAGTTGCATTTGGTTCTTCCTCATGGTATGATTTTTTTGGCTGATGATTCTGTGTTGCTTGAAAATTTTCATGCTTTGTGTAATTATGGGATTCCAAGAAATAGAATGGGGAAAATTTATAAGGAAGCAAAAGAGGTTTTTGGGTATGCTAGTGGGTTGTTGTCATCGAAATTACAAGCTTATGAGAATTTGGGTTTGAGTAGATCAAGTGTTATTAAGCTTGTTGTTTGTTGCCCTTTGCTTTTGGTTGGTGATGTGAGTTGTGAATTTGTTGGTTTGCTTGATTGGTTGAAAAGAATTGGGATTGAAAGTGATTGGATGGTGAATTACTTGTCTTGTTCTAGAACATATAGTTGGAAAAGAATGCTTGATGCCTTGGATTTTCTTCATAAAGTGGGATATTCTGAGGAACAAATGCGTAATTTGTTTAAGGCAAATCCAAATTTGTTATTGGAAGGTTTTGGGAGGAAGGTGTACTTGTTTTTGGGTCGATCACTTAAATTGGGTGTTGAGATGAATGTGATTTATTCTCATTTTGTGGAGTATCCCTCTATCATGTCACATAAGTGTGCCAAAAATCTGTTGAAAGTGATTGGTTTTTTGTGTGTTATTGGAATGGGAAACCATGATGTTGCGTACATTTTGTCTAACTACATGCATCTCCTGAGCATGCATTCCTTGAAAGGTCATAAGACTGTTTGTAAGGAGTTAAAAGTTGGAAAAGCTGATTTGTGCCAAATCATTAAGGATGATCCATTGAAGCTTATTAGTTTGGCTTCAAAACAGGAACAGAAGAGCATCGACCAGGTATACTGTCATGACCCACGAAATTATTTGGAAAAAACAACTTTCTTGCTGAGACTGGGATATACTGAGAACTCTGAGGAGATGGCGAAAGCATTAAAAATGTTCCGAGGGAGAGGTGATGAATTACAAGAGAGGTTTGATTGCCTGGTAGAAGCTGGTTTGGACTACAACAGTGTGATCAAAATGATAAAACAGGCTCCTATGATTCTAAACCAGAGTAGGTCTGTCATTAAAAAGAAGATTGATTTCTTAAGAAACGTTTTAGGTTATCCAGTAGAATGTCTTGTGGGATTCCCATCATACTTTTGCCATGATTTGGAAAAAATTATGCGAAGATTTTCGATGTATGCATGGCTGAAAGAGAGGAATGCAGTTAAACCTACGTTAACCTTGAGTACCATAGTTTCATCCAATGATAAACGGTTTGTAAAATACTTTGTGAATGTGCATCCTCAAGGTCCAGCCGTCTGGAAAGGTCTAAAAAAGTTATCAAATAAAGATAAGAACTAA 1743 0.3878 MISQLNLNGFFISHPSTLQKPLPPQTPSFFSLKVRCFRVCHPTPVPSFSPLSSVPSSRSATRVSRLMRTQVQHVLTDYLHLTRGYSFLDAEFISKNSPRFVESLLSKIDVKDDVARSLRKFLRYNPINEFEPFFESLGISLSELHLVLPHGMIFLADDSVLLENFHALCNYGIPRNRMGKIYKEAKEVFGYASGLLSSKLQAYENLGLSRSSVIKLVVCCPLLLVGDVSCEFVGLLDWLKRIGIESDWMVNYLSCSRTYSWKRMLDALDFLHKVGYSEEQMRNLFKANPNLLLEGFGRKVYLFLGRSLKLGVEMNVIYSHFVEYPSIMSHKCAKNLLKVIGFLCVIGMGNHDVAYILSNYMHLLSMHSLKGHKTVCKELKVGKADLCQIIKDDPLKLISLASKQEQKSIDQVYCHDPRNYLEKTTFLLRLGYTENSEEMAKALKMFRGRGDELQERFDCLVEAGLDYNSVIKMIKQAPMILNQSRSVIKKKIDFLRNVLGYPVECLVGFPSYFCHDLEKIMRRFSMYAWLKERNAVKPTLTLSTIVSSNDKRFVKYFVNVHPQGPAVWKGLKKLSNKDKN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1496 580 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 572 - -
Apr9g1496 580 PANTHER CGI-12 PROTEIN-RELATED 33 572 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 SMART mt_12 319 349 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 SMART mt_12 436 466 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 SMART mt_12 503 536 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 SMART mt_12 179 209 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 Pfam mTERF 268 497 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 Pfam mTERF 450 553 IPR003690 GO:0003690|GO:0006355
Apr9g1496 580 Gene3D Transcription termination factor 3, mitochondrial 300 569 IPR038538 -
Apr9g1496 580 Gene3D Transcription termination factor 3, mitochondrial 103 295 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1496 Apr-Chr9 24512446 24515720 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr9g1496 mTERF 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1496 - - gmx:100803162 906.746