Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1495 ATGATTTCCCAGCTCTGTCGAAACCACAATTTTCTTTTCTTCCCTTGTATACATGAAAAACCCTTTGCAACCCAACACCCATTTTCTGTCTCCCTCAAAGCTCCAAGCTTTTGCGGTTCTAAGGTTACCCATGTTCCTCGAGTTTCAAGGGTGCATTCTATTCAGTCATACTATTCTGTGAAACGGGTATCTCGGTATGTAACGGCCAAAGTGCAGGATGTGCTCTTAGATTACTTGCATTCAAGTAGGGGATATAGCTTCATTGATGCTGAGTTCATTAGCAAAAATTCACCTTTTTTTGTTCAAGGTTTGGTGTCTGAGTTCCATGCACAGGATGATGATGTTGCCAGGTGTTTGAGGAAATTCCTGAGATACAATCCCATTAATGAGTTTGAACCATTTTTTGAGAGTTTGGGAATTAGCCCTCATGAGTTGCATTTGTTTCTCCCACGCGGCATGATGTTTTTGTCTGATGATCATGTTTTGCTTGAAAATTTTCATGCTTTGAGTAATTATGGAATTCCACGAAATAGAATAGGGAAAATTTATAAGGAGACAAAAGAGGTTTTTGGGTATCCTAGTGAACTGTTGTTGTCAAAAATTCGAGCTTACGAGAATTTGTGTTTGAGTAGATCCGTGGTCATCAAGCTTGCTGTTTGTTGCCCTTCACTTTTGGTTGGTGAAACAAGCCGTGAATTGGTCATGATTCTTGATTGGTTGAAGAAAATTGGTATTGAACATGATTGGATTGGGAAATATTTGTCTTGTTCAAAAAGTTATGACTTGAAAAGAATGCTTGATGCTATGCAATTTCTTCATAAAGTGGGCTATTCTGAGAAACAGATGCACAATTTGTTCAAGGAAAACCCTGTATTATTGATGGAAGGTATTGGGAAGAAGCTGTATGCATTTTTGGGTCTATCATTAAAGTTAGGTCTCAGTAAGAATGTGATTTATTCTTCTTTTATAGAATATCCCTATATCATGTCAAATAAATGTGCCAAAAATCTCTTGAGAGTGATTGGTTTTTTGTGTTATGTTGGAATGGAAACAAAAGACATTTCACACATTTTGGCTAAACACATGCATCTCCTGAGCTTGCATCCCTTGAAAGGTCCTAAAGCTGTTTGTTGGCAGTTAAAAATTGGAAAAGCTGATTTATGCCAAATCATAAAGGATGATCCACGGAAGCTTATTAGTTTGGCTTCAAAACTGAAACAGAATAGTGCTGTACAGCTATCGTGTGATGACCCAAGCAAGCATTTAGAGAAAACAACGTTCTTGCTGAAACTGGGATATGCAGAGAACTCTGAGGAGATGGCAAAAGCAGTAAAAAGGTTCCGAGGGAGAGGTGATCAATTACAGGAGAGGTTTGATTGCCTGGTTCAAGCTGGTTTGGACTATAACATTGCAATCAAAATGATAAAACAGGCTCCTATGATTCTAAACCAGAACAAAGTTGTAATTCAAAAGAAGATTGATTTCTTAAGAAACATTTTAGGTTACCCATTAGAATCTGTTGTGGCATTTCCAGTATACTTATGCTATGATTTGGGGAGAATTACGCTCAGACTTTCAATGTATGCATGGGTGAAGGAAAGGAAAGCAGCAAAACCAATGATGACCTTGAGCACTATTCTTGCATCCTCTGAGGAAAAGTTTGTAAAATACTTTGTGAATGTGCATCCTGAAGGTTCAACAGTCTGGGAAGGTCTAAAGAGATTATCGCAAAAGGATTAG 1740 0.3799 MISQLCRNHNFLFFPCIHEKPFATQHPFSVSLKAPSFCGSKVTHVPRVSRVHSIQSYYSVKRVSRYVTAKVQDVLLDYLHSSRGYSFIDAEFISKNSPFFVQGLVSEFHAQDDDVARCLRKFLRYNPINEFEPFFESLGISPHELHLFLPRGMMFLSDDHVLLENFHALSNYGIPRNRIGKIYKETKEVFGYPSELLLSKIRAYENLCLSRSVVIKLAVCCPSLLVGETSRELVMILDWLKKIGIEHDWIGKYLSCSKSYDLKRMLDAMQFLHKVGYSEKQMHNLFKENPVLLMEGIGKKLYAFLGLSLKLGLSKNVIYSSFIEYPYIMSNKCAKNLLRVIGFLCYVGMETKDISHILAKHMHLLSLHPLKGPKAVCWQLKIGKADLCQIIKDDPRKLISLASKLKQNSAVQLSCDDPSKHLEKTTFLLKLGYAENSEEMAKAVKRFRGRGDQLQERFDCLVQAGLDYNIAIKMIKQAPMILNQNKVVIQKKIDFLRNILGYPLESVVAFPVYLCYDLGRITLRLSMYAWVKERKAAKPMMTLSTILASSEEKFVKYFVNVHPEGSTVWEGLKRLSQKD* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1495 579 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 SMART mt_12 504 535 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 Gene3D Transcription termination factor 3, mitochondrial 121 235 IPR038538 -
Apr9g1495 579 Gene3D Transcription termination factor 3, mitochondrial 302 570 IPR038538 -
Apr9g1495 579 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 50 573 - -
Apr9g1495 579 PANTHER CGI-12 PROTEIN-RELATED 50 573 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 Pfam mTERF 269 554 IPR003690 GO:0003690|GO:0006355
Apr9g1495 579 Pfam mTERF 166 294 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1495 Apr-Chr9 24508853 24511717 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr9g1495 mTERF 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1495 - - gmx:100803162 737.258