Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1492 ATGAGGAAAAGAGAGAGGGAGAATCCTTGTGGGGTGTGTGGCCACTATCACAAATACGAAGAAGGGGAAGTGTGTTCGATATGTGGCCACCGGATTCCGGTTGGATCGGAGAAATCTTCGATACAAGTTAGTGCTTTTCCTTCGATGATTTTGCCGGAATTTCTTTACCTAGGTAGCTATGATAACGCTTCACGCTCGGAGCTTCTCAAGACTCAGGGGATTTCTCACATCCTCAATACTGTCCCGTCATGTCAAAATCTTTACAAGAACTCATTTACCTATCACTGCCTCCCAGATGACAAAACTTTGCCATTTGATGAAGCAATTCAGTTTTTAGAACAATGTGAGAATGATAAGGAGCGTGTTTTGGTTCATTGCATGTCAGGAAAGAGTAGGTCTCCAGCTATTGTAATTGCATACTTGATGAAGTCCAAAGGATGGAGACTTGCGCAGAGTTATCAGTGGGTAAAGGAACGGAGACCTTCTGTTGAATTAACTCAAGGTGTCTACCAGCAACTGCAGGAGTATGAGCAAAAGATCTATGGACCAATCGACAGTGGCAGCTCTCTACTACCCAATTTCTCTCCTATCACACCTCCTTCAATCAGCTTCGGTTTCCCAAAGGTCAATGATCCAACTCAGCTTCCTTCCTTTAGCACTGCCGGAACTCCTTCAATTTTCGCCCGAGCACCCCATGACGTTGCTCCCACTGAGTTTACGTTTGGAGCAAGTCAGACACAAAAGAGTGTGACTGGAAGCCCCTTCAATGCAAATCCACCTAATCCAAATGGTACTGATATCCAAATGGATGGTTCTTGA 819 0.4481 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKSSIQVSAFPSMILPEFLYLGSYDNASRSELLKTQGISHILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCENDKERVLVHCMSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTQGVYQQLQEYEQKIYGPIDSGSSLLPNFSPITPPSISFGFPKVNDPTQLPSFSTAGTPSIFARAPHDVAPTEFTFGASQTQKSVTGSPFNANPPNPNGTDIQMDGS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1492 272 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Apr9g1492 272 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Apr9g1492 272 Gene3D Protein tyrosine phosphatase superfamily 40 183 IPR029021 -
Apr9g1492 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 272 - -
Apr9g1492 272 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Apr9g1492 272 CDD DSP_plant_IBR5-like 47 176 - -
Apr9g1492 272 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Apr9g1492 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 272 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Apr9g1492 272 Pfam Dual specificity phosphatase, catalytic domain 55 179 IPR000340 GO:0008138|GO:0016311
Apr9g1492 272 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Apr9g1492 272 MobiDBLite consensus disorder prediction 244 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1492 Apr-Chr9 24471073 24480211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1492 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 75.148 4.35e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1492 K04459 - gmx:100808721 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1492 9 24471073 24480211 Apr9g1492 9 24471073 24480211 ECH