Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1478 ATGCTTAAAGTGGTGGTTTTTACCCTTTTGGTCCTCATGTTGGGGAGTGCCAATGCAACACTTTCCACAAACTTCTATTCCATCTCTTGCCCAAAACTCTTTGAGACTGTGAAATGCACAGTGGAATCCGCCATATCAAAGGAGGCACGAATGGGTGCTTCTCTCCTTCGTTTGTTCTTCCACGATTGCTTTGTTAATGGGTGTGATGGTTCAGTTCTACTTGATGACACATCAAGCTTCACTGGAGAAAAGAATGCAGGTCCCAACAAGAACTCTGCTCGTGGATTTGAAGTGATTGACAAAATTAAGTTGGCGGTGGAGAAAGTGTGCCCAGGTGTCGTTTCCTGTGCTGACATCCTTGCCATCACTGCCAGAGACTCCGTCGCCATCCTTGGAGGGCCAACATGGGACGTGAAGCTTGGAAGAAGAGACTCCAGGACAGCTAGCCAATCAGCTGCCAACAACGGCATCCCAGCACCCTCTTCAAACCTCAATCAACTCATCTCAAAATTCAGTGCTCTTGGACTTTCCACCACAGACTTGGTCGCATTGTCCGGGGGTCACACAATTGGACAGGCAAGGTGCACAAACTTCAGAGGCCGAATCTACAACGAGAGCAACATAGATAGCACCTTTGCTCGCATGAGACAATCTAGGTGCCCAAAAGCCTCAGGTTCAGGTGACAACAACCTGGCACCCCTTGACCTCGCCACTCCAACATTCTTTGACAACCACTACTTCAAGAACCTCATTGAGAAGAAGGGCCTCATTCACTCTGACCAACAACTCTTCAATGGTGGCTCCACTGACTCCATAGTGCGTGGCTATAGCTCCAACCCAAGTTCCTTTTTCTCTGATTTTGCCACCGCCATGATCAAGATGGGAGACATCTCTCCCCTCACTGGCTCAAAGGGAGAGATAAGAAAGAATTGCAGAAGGGTGAACTAA 948 0.4842 MLKVVVFTLLVLMLGSANATLSTNFYSISCPKLFETVKCTVESAISKEARMGASLLRLFFHDCFVNGCDGSVLLDDTSSFTGEKNAGPNKNSARGFEVIDKIKLAVEKVCPGVVSCADILAITARDSVAILGGPTWDVKLGRRDSRTASQSAANNGIPAPSSNLNQLISKFSALGLSTTDLVALSGGHTIGQARCTNFRGRIYNESNIDSTFARMRQSRCPKASGSGDNNLAPLDLATPTFFDNHYFKNLIEKKGLIHSDQQLFNGGSTDSIVRGYSSNPSSFFSDFATAMIKMGDISPLTGSKGEIRKNCRRVN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1478 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Apr9g1478 315 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PANTHER PEROXIDASE 4 314 - -
Apr9g1478 315 Gene3D Peroxidase, domain 2 158 294 - -
Apr9g1478 315 PANTHER PEROXIDASE 72-RELATED 4 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 SUPERFAMILY Heme-dependent peroxidases 21 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr9g1478 315 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Apr9g1478 315 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Apr9g1478 315 Gene3D - 24 315 - -
Apr9g1478 315 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1478 Apr-Chr9 24342580 24353566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1478 19 315 Peroxidase AT5G05340 75.758 3.67e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1478 K00430 - gmx:100791414 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0829 10 20534266 20536497 Apr9g1478 9 24342580 24353566 ECH
Apr9g1478 9 24342580 24353566 Apr9g1478 9 24342580 24353566 ECH