Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1463 ATGGAGAACAAGTACCTGACTTCAAAATGTGTTTTTTACCATGGCCCATGTCATTATTTTGGGTTGTTTTTCTGCTGCATCTTGTGTTTGTGGTTTCTTCTGCTGCCAGTGTTGGGTGAAGAGCGCTGGGATGGAGTGGTTGTGACACAGTCAAATTTCTTGGCACTTCAAGCATTCAAGCAAGAGTTGGTTGATCCAAAAGGGTTATTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGGATCAAGTGTGCTCAAGGACAGGTTATTGTAATCCAGCTTCCATGGAAGGGATTGAAGGGGCACATCACTGAGAGGATTGGCCAACTTCAGGGGCTTAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAGCATTGGGTCTTCTAATCAATCTAAGAGGGGTTCAACTCTTCAACAATAGGTTCACAGGGTCCATTCCTCCTTCATTAGGTTCCTGTCCTTTGCTTCAGTCTTTAGACCTCAGTAACAATTTGCTCACAGGGGTAATCCCTTATACCCTTGGCAATGCCACTAAGCTTTATTGGCTTAACTTGAGCTTTAACTCTCTCTCTGGTCCAATACCTACCAGCCTAACTAGTTTATCTTCTCTCACCTTCTTATCCCTTCAACACAATAATCTCTCAGGCTCTATTCCAAACTCATGGGGTGGTAGCTTGAAGAACCGCTTCTTTCGGCTTCAAAATCTAATCCTAGATCACAACTTCTTGACTGGAAGCATTCCTTCTTCTTTGGGCAGCTTGAGCGAACTCAGAGAGATTTCTCTTAGTCACAACCAATTTAGTGGACCTATACCAAATGAAATAGGAAGCCTTTCTAGGCTTAAGACAATAGATTTTTCTAATAATGCCTTAAATGGAAGCTTGCCAACCACACTCTCCAATGTATCCTCACTCACTCTAATGAATGTAGATAACAACCACCTTGGCAATCAAATCCCAGAAGCTTTAGGCACTTTGCGTAATCTTTCTGTTCTAGTTTTGGGCAGTAACCAATTTAGTGGCCACATTCCTCAAAGTATTGGAAACAGTACAAAGCTTACTCAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCATCCTCCTTCAACAATCTAAGTAGTCTAAACTTCTTCAATGTTTCTCATAATAGCCTTTCTGGTCCAGTTCCAACTCTACTTGCCCATAAATTTAACTCAAGTTCATTTCTAGGAAATATTCAACTATGTGGATACAGCCCTTCAACCCCGTGTCCCTCACCAGCTCCTTCTGAAGGATCAGGAGGAATCCATGGTGTACCTTCTGAAACATCAAAGCACCACCATCATAAGAAACTAGGCATCAAAGACATAATCCTCATAGTAGCAGGAGTGCTCCTTGTAGTTTTGGTAACACTTTGTTGCATCCTACTCTTCTGCCTGATCAGAAAAAGAGCAACATCAAATGTAGAGGGTGGCCAAGCCACAGGGAGAGGGGCTGCTGCTGCTGCTAGCAGGACCGAAAAAGGAGTTCCTCCTGTTGCAGGTGAAGGTGAAGCAGGTAGTGAAGCTGGTGGAAAACTAGTCCATTTTGATGGGCCATTAGCTTTTACTGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACCTATGGAACTGTTTACAAGGCCACATTAGAGGATGGAAGTCAAGCAGCAGTGAAACGATTGAGGGAAAAGATCACTAAAGGTCAGAGGGAATTTGAATCAGAAGTTAGTGTTCTTGGCAGAATTCGACACCCAAATCTTTTGGCATTAAGAGCCTATTACTTGGGACCCAAAGGAGAAAAACTTCTAGTTTTTGATTACATGCCCAAGGGAAGTCTTGCATCTTTCCTACATGCTCGTGGGCCTGAAACAGCAATTGATTGGCCAACAAGGATGAAAATAGCACAGGGCATGGCTCGTGGCTTGTTTGACCTTCATTCCCATGAGAACATAATACATGGGAACCTTACGTCCAGCAATGTGTTGCTGGATGAGAACACGAACGCTAAAATAGCTGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAACGTGATTGCTACTGCTGGAGCATTGGGATACCGAGCCCCTGAGCTTTCAAAGCTTAAGAAAGCCAACACAAAAACTGATGTGTACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGCGTTGATTTACCTCAGTGGGTTGCCTCTATCGTCAAAGAGGAGTGGACAAATGAGGTTTTCGATGTAGAGCTGATGAGAGATGCTTCAACATATGGTGACGAGTTGCTAAACACGTTGAAACTTGCTTTGCATTGTGTTGATCCCTCTCCATCAGCACGACCAGAAGTTCAGCAGGTCCTCCAGCAGCTAGAAGAGATTAGACCAGAAATATCAGCCAGTTCTGGTGACGATGGAGCCATCCCTTCGACCAGTGAATAA 2520 0.4373 MENKYLTSKCVFYHGPCHYFGLFFCCILCLWFLLLPVLGEERWDGVVVTQSNFLALQAFKQELVDPKGLLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLQGLRKLSLHDNQIGGSIPSALGLLINLRGVQLFNNRFTGSIPPSLGSCPLLQSLDLSNNLLTGVIPYTLGNATKLYWLNLSFNSLSGPIPTSLTSLSSLTFLSLQHNNLSGSIPNSWGGSLKNRFFRLQNLILDHNFLTGSIPSSLGSLSELREISLSHNQFSGPIPNEIGSLSRLKTIDFSNNALNGSLPTTLSNVSSLTLMNVDNNHLGNQIPEALGTLRNLSVLVLGSNQFSGHIPQSIGNSTKLTQLDLSLNNLSGEIPSSFNNLSSLNFFNVSHNSLSGPVPTLLAHKFNSSSFLGNIQLCGYSPSTPCPSPAPSEGSGGIHGVPSETSKHHHHKKLGIKDIILIVAGVLLVVLVTLCCILLFCLIRKRATSNVEGGQATGRGAAAAASRTEKGVPPVAGEGEAGSEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPETAIDWPTRMKIAQGMARGLFDLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPEISASSGDDGAIPSTSE* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1463 839 Gene3D Ribonuclease Inhibitor 307 431 IPR032675 -
Apr9g1463 839 Gene3D Ribonuclease Inhibitor 207 306 IPR032675 -
Apr9g1463 839 Gene3D Ribonuclease Inhibitor 50 206 IPR032675 -
Apr9g1463 839 Pfam Leucine rich repeat 338 398 IPR001611 GO:0005515
Apr9g1463 839 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Apr9g1463 839 Pfam Protein tyrosine and serine/threonine kinase 552 817 IPR001245 GO:0004672|GO:0006468
Apr9g1463 839 Gene3D Transferase(Phosphotransferase) domain 1 627 831 - -
Apr9g1463 839 SUPERFAMILY L domain-like 89 424 - -
Apr9g1463 839 MobiDBLite consensus disorder prediction 820 839 - -
Apr9g1463 839 SMART LRR_typ_2 116 140 IPR003591 -
Apr9g1463 839 SMART LRR_typ_2 265 289 IPR003591 -
Apr9g1463 839 SMART LRR_typ_2 212 235 IPR003591 -
Apr9g1463 839 SMART LRR_typ_2 164 187 IPR003591 -
Apr9g1463 839 SMART LRR_typ_2 385 408 IPR003591 -
Apr9g1463 839 SMART LRR_typ_2 337 361 IPR003591 -
Apr9g1463 839 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 830 - -
Apr9g1463 839 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 830 - -
Apr9g1463 839 MobiDBLite consensus disorder prediction 496 526 - -
Apr9g1463 839 Gene3D Phosphorylase Kinase; domain 1 555 626 - -
Apr9g1463 839 CDD STKc_IRAK 555 820 - -
Apr9g1463 839 Pfam Leucine rich repeat N-terminal domain 54 90 IPR013210 -
Apr9g1463 839 ProSiteProfiles Protein kinase domain profile. 549 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1463 839 SUPERFAMILY Protein kinase-like (PK-like) 553 821 IPR011009 -
Apr9g1463 839 MobiDBLite consensus disorder prediction 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1463 Apr-Chr9 24231483 24235020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1463 43 822 Receptor kinase-like Gene Family AT3G51740 63.718 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g1463 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1463 - - gmx:100811174 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1463 9 24231483 24235020 Apr10g2152 10 34094958 34097726 ECH
Apr9g1463 9 24231483 24235020 Apr9g1463 9 24231483 24235020 ECH
Apr10g2152 10 34094958 34097726 Apr9g1463 9 24231483 24235020 PCT