Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g1460 | ATGGGTGCTTATGATCAAGTTTCTGTTCGGCCCATGGATTCTTCTAGAAAGAGGAAAAGTAGGAGCCGAGGGGATGGGTCTAAATCTGTGGCTGAGACTTTGGCTAAGTGGAAGGAATACAATGAGCATCTTTATAGTAAAGATGATGCCAGACCAACTCGTAAAGCCCCAGCTAAAGGGTCAAAGAAAGGGTGCATGAAAGGAAAGGGAGGACCCCAAAACTCACAGTGTAACTACAGAGGTGTTAGGCAGAGGACATGGGGGAAATGGGTTGGGGAGATTAGGGAGCCAAATAGAGGAAGTAGGCTTTGGTTGGGAACCTTTTCTACTGCCCAAGAAGCTGCTCTTGCCTACGATGAAGCTGCTAGAGCCATGTACGGTCCATGTGCACGCCTCAACTTCCCCCACATATCAGATTATACTTCTGTCAAAGAAGCTTTGAGGGACTCTTCCTTGGCAGCATCATCTCCTTGTTCTTCAGTGGCAACTCCTGCAGCCTCTGACACAACTACTACATCCAATCAATCAGAGGTTTGTGCAGCTGAGGATGTTAAGGAGAAGCCTCTGCCTGTCAACATGAACAATATGGTTAATGCTTGTTACAATGCGTATGAAGCTGCCTCGCCTACTAGCAAAATAAAGCAAGAGCCTAAGGATGAGCCTCAGGATCTCCCTGATCCAGGGGGTGGTGAAATTCAAGATATCATACCTGAAGGAATGCATAATATTGGGCAGGTTGCAGAGGACGTAAATAAAGATCAGATGGACTTTTCTTGGTTTGATGGCTTTGATTTTAATGGTGATTACTTGAAGAGCTTTTCCATGGATGAGCTATTTCAGGTGGATGAACTTTTGGGGGATATAGATAATAATCCTATTGATAGCACTGGGTTGATGCAAGGTTTGGATTTTGGACAAATGGGTTTTCCTGGAGATAGTAATCCTCAGGTGGAGTCGCCTTCAAGCTTTTTCTATCAGTTACAAAACCCAGATGCTAAGTTGTTGGGAAGTTTGCCCCATATGGAACAAACACCGTCAAGTGTTGATTATGGATTAGATTTCTTGAAAACAGTAGAGCCGGGGGACTATAATGGTGGAGGGGAAGAACCGCGATTTCTTAATTTGGATGATGATCTGAACAATGGTTCAAAGGGAATGCAAATAAAGAAGGATGATTAG | 1179 | 0.4427 | MGAYDQVSVRPMDSSRKRKSRSRGDGSKSVAETLAKWKEYNEHLYSKDDARPTRKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSTAQEAALAYDEAARAMYGPCARLNFPHISDYTSVKEALRDSSLAASSPCSSVATPAASDTTTTSNQSEVCAAEDVKEKPLPVNMNNMVNACYNAYEAASPTSKIKQEPKDEPQDLPDPGGGEIQDIIPEGMHNIGQVAEDVNKDQMDFSWFDGFDFNGDYLKSFSMDELFQVDELLGDIDNNPIDSTGLMQGLDFGQMGFPGDSNPQVESPSSFFYQLQNPDAKLLGSLPHMEQTPSSVDYGLDFLKTVEPGDYNGGGEEPRFLNLDDDLNNGSKGMQIKKDD* | 393 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g1460 | 392 | PRINTS | Ethylene responsive element binding protein signature | 79 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Apr9g1460 | 392 | PRINTS | Ethylene responsive element binding protein signature | 101 | 117 | IPR001471 | GO:0003700|GO:0006355 | |
Apr9g1460 | 392 | SMART | rav1_2 | 78 | 141 | IPR001471 | GO:0003700|GO:0006355 | |
Apr9g1460 | 392 | MobiDBLite | consensus disorder prediction | 210 | 231 | - | - | |
Apr9g1460 | 392 | SUPERFAMILY | DNA-binding domain | 78 | 136 | IPR016177 | GO:0003677 | |
Apr9g1460 | 392 | MobiDBLite | consensus disorder prediction | 359 | 392 | - | - | |
Apr9g1460 | 392 | Pfam | AP2 domain | 77 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Apr9g1460 | 392 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 11 | 362 | - | - | |
Apr9g1460 | 392 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Apr9g1460 | 392 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Apr9g1460 | 392 | ProSiteProfiles | AP2/ERF domain profile. | 78 | 135 | IPR001471 | GO:0003700|GO:0006355 | |
Apr9g1460 | 392 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 11 | 362 | - | - | |
Apr9g1460 | 392 | MobiDBLite | consensus disorder prediction | 45 | 78 | - | - | |
Apr9g1460 | 392 | Gene3D | AP2/ERF domain | 78 | 137 | IPR036955 | GO:0003700|GO:0006355 | |
Apr9g1460 | 392 | MobiDBLite | consensus disorder prediction | 154 | 178 | - | - | |
Apr9g1460 | 392 | CDD | AP2 | 77 | 136 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g1460 | Apr-Chr9 | 24208664 | 24211860 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g1460 | 16 | 382 | AP2-EREBP Transcription Factor Family | AT2G40340 | 39.418 | 2.21e-68 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Apr9g1460 | AP2 | 1.3e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g1460 | - | K09286 | gmx:100800134 | 609.757 |