Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1448 ATGAGCAAGAACAGGAAACTCATTCGGTTCAGCAATCTTTGTGGGCTTTCGCGCTTTCTGGTGGTGTTCTTGTTGTTTCACAACTTGGGTTTGTGCTGTTCTTTAAATGATGAAGGTCATGTTCTTTTGAAGTTGAGGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGATTGACGATGAAGCAGTTCTTGACCCTTGTAATTGGTTCGGAGTTGAATGCTTAGATGGAAGAGTTGTGGTCTTGAATTTGAAAGATCTCTGCCTTAAAGGAACTCTGGCACCTGAGATTATGAACCTGGTACACATAAAGTCTATTATTTTGAGGAACAACTCATTCTTTGGGACCATACCTGAAGGATTTGTTGATTTGCAAGAATTGGAGATTTTGGATTTGGGATACAACAACTTCAGTGGACATCTACCTGCTGATCTTGGGAGTAATATCTCACTAGCAATCCTTTTGCTAGACAACAATGAGTTTCTTGTTGGTTTCTCTCCCGAAATCAATGAACTGAAGATGCTTTCTGAATGTCAAGTGGATGAAAACCATCTAACTAATGCTGCTAAAATGCCAGTTTGTGCAGAAAAATCCAACACATGGCATATTGGTCAAAGAAAAGGTTCTCGGGGCCTACTAGAAAACAATATACAATATCGTCGTTCTCACGAAGACCCTCGTAATCGTGAGGCTAATTCCCCTCTTACGAGCCCTTCTCCTGCTGCTTCCCCATCACCACAAGTTCAGAATTCAATTCCTCCTAAGGAAAATGCTTTTCATTCTCCTCCTTCTCTGTCTACACCAGGCTTTGAACCACTATCTAAAAGCACCTCCTCAAGAAATCATCGAGTCCCTATTTTTGTTGGAGTTATTGGTGCTGTATTACTTCTTATTACTTGCATTGGAATATATCTTTGGAAAACCGACAAGGTTGCTAATGTCAGACCTTGGGCCACGGGACTAAGTGGACAGCTTCAGAAGGCCTTTGTGACTGGTGTGCCAAAGCTAAAGAAATCAGACCTTGACGCAGCATGTGAAGATTTTAGTAATGTAATTGGCACTTCACCCATTGGTGCACTGTACAAAGGAACTTTGTCTAGTGGTGTGGAAATAGCTGTAGCTTCTATTCCGAAGACATCATCTAAGAATTGGTCGAAGACTTTAGAAGCCCAATTTAGAAAGAAGGTAGATACATTGTCGAAAGTGAACCACAAGAATTTTATCAATCTTATTGGATATTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTAGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCAATGGGTATGGCTTATTGCCTGCAACATATGCACCAGTTGGACCCTCCTAGTGTCCTTATCAAGCTGAATTCATCAACTGTTTACCTGACTGATGACTATGCTGCCAAAATCTCAGATTTGAGTTTCCCTACTGAAATAACTTCTTCAGCTGAGACTAAAACTGGTGACAGAAAACACATTAACACACCAATAGCAAGTCCAGAAAGTAATGTGTATAGCTTTGGTGTTTTATTATTTGAAATGATTACTGGTCGTCTCCCTTATACAGTGGAAGAAGGAGATTCACGTGAAAACTGGGCATCACACTATTTGCAAGGAGACCAACCCATCAAAGAAATCGTGGATCCAATTCTAGCATCTTACCAAGAAGATCAACTTGAACAACTTGTTGCACTGATTAAATCTTGTGTTCAACCTGATCCAGAGCAGAGGCCAAAAATGAAAGATGTCAGTGAGAGGTTGAGAGAGATAACAAAAATAACAGCTGAATCTGCATTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCAGCAGAAGCACGCTGA 1932 0.4063 MSKNRKLIRFSNLCGLSRFLVVFLLFHNLGLCCSLNDEGHVLLKLRQRIVSDPFGALSNWIDDEAVLDPCNWFGVECLDGRVVVLNLKDLCLKGTLAPEIMNLVHIKSIILRNNSFFGTIPEGFVDLQELEILDLGYNNFSGHLPADLGSNISLAILLLDNNEFLVGFSPEINELKMLSECQVDENHLTNAAKMPVCAEKSNTWHIGQRKGSRGLLENNIQYRRSHEDPRNREANSPLTSPSPAASPSPQVQNSIPPKENAFHSPPSLSTPGFEPLSKSTSSRNHRVPIFVGVIGAVLLLITCIGIYLWKTDKVANVRPWATGLSGQLQKAFVTGVPKLKKSDLDAACEDFSNVIGTSPIGALYKGTLSSGVEIAVASIPKTSSKNWSKTLEAQFRKKVDTLSKVNHKNFINLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVAMGMAYCLQHMHQLDPPSVLIKLNSSTVYLTDDYAAKISDLSFPTEITSSAETKTGDRKHINTPIASPESNVYSFGVLLFEMITGRLPYTVEEGDSRENWASHYLQGDQPIKEIVDPILASYQEDQLEQLVALIKSCVQPDPEQRPKMKDVSERLREITKITAESAFPKLSPLWWAELEISSAEAR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1448 643 Gene3D Phosphorylase Kinase; domain 1 322 431 - -
Apr9g1448 643 Pfam Protein tyrosine and serine/threonine kinase 352 612 IPR001245 GO:0004672|GO:0006468
Apr9g1448 643 Gene3D Transferase(Phosphotransferase) domain 1 432 625 - -
Apr9g1448 643 MobiDBLite consensus disorder prediction 224 281 - -
Apr9g1448 643 PANTHER PROTEIN MALE DISCOVERER 2 1 640 - -
Apr9g1448 643 ProSiteProfiles Protein kinase domain profile. 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1448 643 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Apr9g1448 643 SUPERFAMILY Protein kinase-like (PK-like) 348 630 IPR011009 -
Apr9g1448 643 SUPERFAMILY L domain-like 34 191 - -
Apr9g1448 643 MobiDBLite consensus disorder prediction 234 281 - -
Apr9g1448 643 Gene3D Ribonuclease Inhibitor 34 217 IPR032675 -
Apr9g1448 643 PANTHER LRR RECEPTOR-LIKE KINASE 1 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1448 Apr-Chr9 24109654 24113884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1448 16 612 Receptor kinase-like Gene Family AT5G16000 26.115 1.38e-51 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr9g1448 PK_Tyr_Ser-Thr 5.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1448 - - gmx:100820416 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1448 9 24109654 24113884 Apr9g1448 9 24109654 24113884 ECH
Apr10g2137 10 33984524 33988972 Apr9g1448 9 24109654 24113884 PCT