Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1443 ATGAAGGGTTACGAACCCCGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTCTTGAAAAGAAGATGCATACCCAATTGTATATTTGCACCATACTTTCGTTCTGACGAGTGCAAGAAATTTGCCAAGGTTCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTGCCAGAAGAGCAGAGGGAAGACACGGTGAATTCACTGGCTTATGAGGCAGAAGCGAGGCTTAGAGACCCAGTTTATGGATGCATTGGTGCCATAGCTCTTTTGCAAAGGAAGATGGTGGAGCTTCAACATGATCTTGCCATTGCTAAGGACCGTCTTGCTCGCTATGCTGCTGCTGCTACCACCCCTTCCACTACTGATATCTTGAATGCCCATGTTAGTTTGCCACCTTTCCCTGATATCTTCACTACCACTGATTTCAATGACAGCTTCTGCCACAGCTCTTCATCTCAATCATTGAGCAGACATGAAACGGTGGATGATTTCATTCAAATCCCATATATATTTTGA 525 0.4495 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSTTDILNAHVSLPPFPDIFTTTDFNDSFCHSSSSQSLSRHETVDDFIQIPYIF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1443 174 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Apr9g1443 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 168 - -
Apr9g1443 174 Coils Coil 90 117 - -
Apr9g1443 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 168 - -
Apr9g1443 174 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1443 Apr-Chr9 24085291 24086001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1443 1 145 AS2 family AT3G11090 66.207 1.14e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr9g1443 LOB 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1443 - - gmx:100777635 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1443 9 24085291 24086001 Apr9g1443 9 24085291 24086001 ECH