Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1442 ATGGGAAGTTGTGTGCGTGTGAAAGAAGCATCAATGGTTACACCTTCTGAAACCACCCCATCCACTGTCCTCGCTCTATCGGCTCTTGACTCCCAACTCTTCCTTCGCTTCACCATAGAGTACCTCTTCCTCTACAAGCCTTCCCCTCCCGTCGACCAGGATGCCACCACGGCCCGTCTCAAAGCAGCATTAGCGCAAGCACTGGTACCCTATTACCCCTTTGCCGGGAGGGTTAGGCCCAGGCCCGACTGCTTGGGCCTCGAGGTGGCATGTGGGGCCCAGGGCGCGGTGTTCATAGAAGCCTTTGCTGACAGTTACAACGCCATAGACTTCGAGAAAGCACCTAAAACAGTTACCCACTGGAGAACTCTCTTGTCGCTCCACGTGGCAGATGTTCTCAAGGGTTCGCCGACTTTGGTCGTTCAGCTGACGTGGCTCAGCGACGGAGCCGCCGCAATCGGCGTGGGGATCAACCACTGCATCTGCGACGGCATCGGGAGTGCCGAGTTTCTAAACTATTTCGCCGAGTTAGCTCGTGAAAAACACGCGCCGCTCAACGAGTTAGCTCCTAGGCCCAAACCTATCTGGGACCGCCACCTTCTGAACCCGCCACAAGTGAAACAGACGCGAGTTAACCCGGTGAGTCACCCCGAGTTCAAACGAGTGCCCGACCTCTGCGGTTTCATGAACCGGGTCTCCACCGGGCTTAAACCAACCTCTATAACATTCGACAAAAGGCGACTCGGCGAGCTGAAGAGACTCGCTTGCATTACGAGTGAGCCCGGCGAGTCGGTGGTTTACACGTCGTTCGAGGTTCTTGCGGCTCACGTGTGGAGGAGCTGGGCGAGAGCACTGAGGTTTCCGCCGAACCAAATGTTGAAGCTGTTGTTCAGTATAAACGTGCGGAAGCGCGTGAAGCCGTGTTTACCCGAGGGGTATTATGGGAACGCATTTGTTCTGGGGTGTGCGGAAGCGAGTGCGGAAGAGCTGGGGGAGAGGGGAATCGGGTTCGGGTCGGGTTTGGTGAAGCAGGCGAAGGAGAGAGTGGGGAAGGAGCACGTGAGGGGTGTGATGGATTTGGTGTCGGAGAGAAGAGCGTGTCCTGACCCGGTTGGGGTGTTGATAGTGTCACAGTGGTCAAGGCTGGGTTTGGAGAGCGTTGACGTGGGAATGGGGAAGGCCGTTCATGTGGGACCCGTTTGCTGTGATAGGTACTGTTTGTTTTTGCCTGTGAGAGATGAGTGTGTGGGTGTGAATGTCATGCTCGCTGTCCCTACACCTGCCGTTGACAATTACGAGCTTTTCATGCATCTGTGA 1317 0.5604 MGSCVRVKEASMVTPSETTPSTVLALSALDSQLFLRFTIEYLFLYKPSPPVDQDATTARLKAALAQALVPYYPFAGRVRPRPDCLGLEVACGAQGAVFIEAFADSYNAIDFEKAPKTVTHWRTLLSLHVADVLKGSPTLVVQLTWLSDGAAAIGVGINHCICDGIGSAEFLNYFAELAREKHAPLNELAPRPKPIWDRHLLNPPQVKQTRVNPVSHPEFKRVPDLCGFMNRVSTGLKPTSITFDKRRLGELKRLACITSEPGESVVYTSFEVLAAHVWRSWARALRFPPNQMLKLLFSINVRKRVKPCLPEGYYGNAFVLGCAEASAEELGERGIGFGSGLVKQAKERVGKEHVRGVMDLVSERRACPDPVGVLIVSQWSRLGLESVDVGMGKAVHVGPVCCDRYCLFLPVRDECVGVNVMLAVPTPAVDNYELFMHL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1442 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 435 - -
Apr9g1442 438 Pfam Transferase family 5 426 - -
Apr9g1442 438 Gene3D - 3 221 IPR023213 -
Apr9g1442 438 Gene3D - 230 435 IPR023213 -
Apr9g1442 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1442 Apr-Chr9 24075557 24076967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1442 5 436 Monolignol Biosynthesis Gene Families AT5G48930 27.333 1.52e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1442 - - gmx:100817048 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1442 9 24075557 24076967 Apr9g1442 9 24075557 24076967 ECH
Apr10g2131 10 33948699 33950132 Apr9g1442 9 24075557 24076967 PCT