Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1441 ATGGAGAACCAGCACCCACCCCAACCTTATCACCAGCCTCAACCCCAAGAAACCAAATCCACCGCCACTACCGCCATAACCACCACTCTTCATCAAACATCTAACAGTAATAATAGCAGTAGTAGCAGCACCACAACCGCTAACAAAAGTAATCGTAAATGCAAAGGCAAAGGTGGCCCTGACAACAACAAATTTAGATACCGTGGAGTGAGGCAACGAAGCTGGGGCAAATGGGTTGCGGAGATCCGAGAGCCACGTAAGCGAACCCGTAAGTGGCTTGGCACCTTCGCCACCGCCGAAGATGCCGCCAGAGCCTACGACCGCGCTGCCGTTATTCTTTACGGCTCTAGGGCTCAACTTAACCTCCAACCCTCAGCTTCTTCTACTCAATCTTCCTCTTCTCGTTCTTCTTCTTCTTCCTCTTCTTCTCAAACCCTTCGACCCTTGCTTCCTCGTCCTTCGGGCTTCGCCTTCACCACCGCTTCCCATCTTCCGGTGCTGTTCAACGCCACCTCCAACATGCCTTTTGGGGTTTATAACAACAATTACACCCCATCGGTGTTGTGCCCTTTTGATAATAATGTAGTGCAACTTCATCAGCATCATCACTATCTTCGTCCAGAGGAAATGGTGCAAGTACAACAACAGCAGCAACAACAGTGTCAACACTCGGAATCTGATGTGAGTGTAGCAGCTGGGATTATTATTGCAGATGAAAATTCTATGAGAACAACCTCGTACCAAAATCAAAGTTATCAGGATCATCTCGTACAACATAGTCATGTGTCGAACCAACAGCAGCATCAGAATTGCATGGTTGATGGAATGAATTCGGTGGTGGGGTCGGTTGGGTCAAGCTTGTCTTCTCAGGTGGATGTGGATGCAACGGTGGATCCGGATCCGTCGTTGGTGGGGACAGTGGGTCTTGGATCTCCGTCTATGTGGTCGTTGACAAATGAAGACGATTATTCTGGTAGCTTATGGGATTATAATGATCCTTTTTTCTTCGATTTTTAA 1017 0.4798 MENQHPPQPYHQPQPQETKSTATTAITTTLHQTSNSNNSSSSSTTTANKSNRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVILYGSRAQLNLQPSASSTQSSSSRSSSSSSSSQTLRPLLPRPSGFAFTTASHLPVLFNATSNMPFGVYNNNYTPSVLCPFDNNVVQLHQHHHYLRPEEMVQVQQQQQQQCQHSESDVSVAAGIIIADENSMRTTSYQNQSYQDHLVQHSHVSNQQQHQNCMVDGMNSVVGSVGSSLSSQVDVDATVDPDPSLVGTVGLGSPSMWSLTNEDDYSGSLWDYNDPFFFDF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1441 338 MobiDBLite consensus disorder prediction 122 147 - -
Apr9g1441 338 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 336 - -
Apr9g1441 338 Pfam AP2 domain 66 110 IPR001471 GO:0003700|GO:0006355
Apr9g1441 338 CDD AP2 66 123 IPR001471 GO:0003700|GO:0006355
Apr9g1441 338 MobiDBLite consensus disorder prediction 1 68 - -
Apr9g1441 338 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Apr9g1441 338 MobiDBLite consensus disorder prediction 14 52 - -
Apr9g1441 338 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Apr9g1441 338 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Apr9g1441 338 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Apr9g1441 338 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 11 336 - -
Apr9g1441 338 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Apr9g1441 338 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Apr9g1441 338 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1441 Apr-Chr9 24058395 24059411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1441 52 338 AP2-EREBP Transcription Factor Family AT2G40220 45.928 8.21e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr9g1441 AP2 4.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1441 K09286 - gmx:100779779 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1441 9 24058395 24059411 Apr9g1441 9 24058395 24059411 ECH