Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1440 ATGTCGAACCAGGACGCTCCGCCATTCAGTTGGCACTACGACGCGGAGCTCAACGACGAAACCCTCGAAATCCATGGCCGCAAACTCTTCTTCATCATCGTTCTCTTCTCCATTATCCTCCTTTTCACCGCTCTCTTTCTCTTCGCTCGCCGGATCTGCCGCCGCCACGGCCTTCTCCCAATCACCACCTTCCACTCAATCCAGCCACGCCACGCGCCGCCGCCGTCGCCGCCACAGGGACTCGACCCCGACGCGATCAAGAAACTCCCGATCATCCTCCACCAGGCGCCGCCGAGTCCGAATCGCGCATTGGAGGAAACGGAGTGCTGCATCTGCCTCAGCGCGTTCGTTGACGGTGAGAAGTTGAAGGTTTTGCCGGGATGTGACCATAGTTTTCATTGCGAGTGCGTCGACAAGTGGCTCGTGAATCACTCCAATTGTCCTCTTTGTAGAGCTTCCCTTAAGTTCGATTCTTCGTTTCCCAGGGTTTTGATCCAAGAACCACCAATTAGACATAGTGTCCCACTTTGA 531 0.5556 MSNQDAPPFSWHYDAELNDETLEIHGRKLFFIIVLFSIILLFTALFLFARRICRRHGLLPITTFHSIQPRHAPPPSPPQGLDPDAIKKLPIILHQAPPSPNRALEETECCICLSAFVDGEKLKVLPGCDHSFHCECVDKWLVNHSNCPLCRASLKFDSSFPRVLIQEPPIRHSVPL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1440 176 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 166 IPR044675 -
Apr9g1440 176 SUPERFAMILY RING/U-box 100 158 - -
Apr9g1440 176 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Apr9g1440 176 PANTHER RING-H2 FINGER PROTEIN ATL66 2 166 - -
Apr9g1440 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 156 IPR013083 -
Apr9g1440 176 Pfam Ring finger domain 108 151 IPR001841 -
Apr9g1440 176 SMART ring_2 109 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1440 Apr-Chr9 24045267 24045797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1440 2 159 C3H Transcription Factor Family AT3G11110 40.491 1.19e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1440 - - gmx:100794554 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2129 10 33935412 33937067 Apr9g1440 9 24045267 24045797 PCT