Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1426 ATGGCTGTGTCCAACGGCGTCGAAGCTGTGTTAGAGTTTCTGAGGAAAAATGGCTTGTCGGAAGCAGAGTCTGCTCTCAGAGAAGACATCATCAACAACACTGATCTCGGAACCTTTGACTACGAGAAGTTCTTCTTCCCCATGGTGCCGCCTCCGCCTCCGGTCAGAGTGCGATCGTCGGAGCTCGCCGCCGGCGACTGCTCCAAATCCAGTTCCGATGAGTTTGTCAGCATCGGTTCTTCTACTTCTCGTGTTTCTTCTGCAGAATTTATCAATCCGTATGGAATTCGCTCTGCATCTCAGACTCAGAATGATTCTGATTCTTCATCTGATAGATTATCTCAGTTTGGCACGGCTCGGGATTATCACGAATTTGATATGCAAAATGAACCATATTGGTATAACGAAAAAGATGAAGACTATTTCATGACTCCAAGTTTCGAAGGGCCAGATTTCTTTGGATGTCAAAGCGAAGACAAGTTTGTCATGACAGCAGAAACAGAAAATCAACATGACGATTCTCTGGACCGTGATTACAACAATGAAAAATTTCAATTAGAGGGAAATGGTGCTTACATGGACAAGGCATGTCTTTATAATCATTCGTCCGTAGAGGATGGAAATGTGACTTGTTCAAAGGCACAAGATGGTGGAGAAATAGCTGAAGAGTGCCAAGATCCAGGGATTGCTGCAGATGGAGAGGATGCTACTGATGATGAGCTCTTAAAGTATACTCAAGAGGATGAATATGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTGAATACAATCTTGGCTGGCAGATATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCCTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAACTTCTGAAACTTGTCAATAAGCATGACCCAGCAGATGAACACCACATTTTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAATTTATATGAATTTCAGAAATTCAACCAAGAATCAGGAGGGGAAGCATATTTTACATTGAACAGATTGCAGTTCATTACTCGACAGTGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTATAAAAGATGTGAGATAAAGGTCATTGATCTTGGAAGCAGTTGCTTTCAAACAGACAATCTGTGCCTATATGTACAATCCCGATCCTATAGGGCTCCTGAAGTGATGTTAGGCCTTCAATACGATGAAAGGATTGATATATGGTCTCTAGGCTGTATATTGGCTGAGTTATGCTCTGGTGAAGTACTATTTCCAAATGATGCAGTTGTGATGATTCTTGCACGCATGATTGGAATGCTTGGTCCTATTGATCTAGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTTACCAAAGAATATGATATTTACTATGTGAATGAGGAAACTGATCAATTGGAGTACATAATTCCAGAGGAATCATCATTGGAGCAACATCTACAGGTTACTGATATTATGTTTATAGACTTTGTCAGATACTTGCTTAGAATCAATCCTAAAGGAAGGCCTACTGCAAGACAAGCCCTGAAGCATCCATGGCTTTCCTGTGTTTACTAG 1773 0.405 MAVSNGVEAVLEFLRKNGLSEAESALREDIINNTDLGTFDYEKFFFPMVPPPPPVRVRSSELAAGDCSKSSSDEFVSIGSSTSRVSSAEFINPYGIRSASQTQNDSDSSSDRLSQFGTARDYHEFDMQNEPYWYNEKDEDYFMTPSFEGPDFFGCQSEDKFVMTAETENQHDDSLDRDYNNEKFQLEGNGAYMDKACLYNHSSVEDGNVTCSKAQDGGEIAEECQDPGIAADGEDATDDELLKYTQEDEYEVFDLRIIHRKNRTGFEENKELPIVLNTILAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQFITRQCLEALQYLHSLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDERIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLEMLVKGQETHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVTDIMFIDFVRYLLRINPKGRPTARQALKHPWLSCVY* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1426 590 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 210 - -
Apr9g1426 590 PANTHER DUAL SPECIFICITY PROTEIN KINASE 230 590 - -
Apr9g1426 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Apr9g1426 590 SMART serkin_6 284 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1426 590 SUPERFAMILY Protein kinase-like (PK-like) 273 587 IPR011009 -
Apr9g1426 590 ProSiteProfiles Protein kinase domain profile. 284 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1426 590 CDD PKc_DYRK_like 284 586 - -
Apr9g1426 590 Gene3D Transferase(Phosphotransferase) domain 1 338 586 - -
Apr9g1426 590 Gene3D Phosphorylase Kinase; domain 1 279 365 - -
Apr9g1426 590 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 210 - -
Apr9g1426 590 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 230 590 - -
Apr9g1426 590 Pfam Protein kinase domain 286 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1426 Apr-Chr9 23883371 23888232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1426 281 581 MAP Kinase Gene Family AT5G19010 32.087 9.88e-35 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Apr9g1426 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1426 - - csin:114322441 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1426 9 23883371 23888232 Apr9g1426 9 23883371 23888232 ECH